| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1875 |
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| Symbol | |
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| ID | 8883067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1965214 |
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| End bp | 1967979 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003510664 |
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| Protein GI | 291299386 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0222305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00126827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAGTTTC GAGTCCTGGG TGCCGTCGAG GCGGTCGCCG ACGGGGTGAC CGTCGATATT
GGACCTGCTT CTCGGCGTGC GGTGTTGGCG ATTCTGCTGG TCGAGGTGGG CCGGGTGGTT
TCGGTGGAGC AGCTGATCGA CCGGCTGTGG CGGGACGCGC CGCCCCGCGG GGCCCGGGAC
AGTCTGTACA GCTACCTGTC GCGGTTGCGG TCCGGCTTGG GGGACGGGCT GATCCGGCGG
CGCTCGGGCG GGTATGTGGT GACGGTCGAT CCGGTGAGCG TGGACCTGCA TCGGTTTCGG
AAACTGGTGG GGGAGGCTCG ACGGTCTACT GGGGATGATG AATCGGCGGA GCTGTTCGAA
GCGGCCTTGC GACTGTGGCG CGGGGAGGCG TTCGAAGGGC TGGACGTGCC GTGGCTGCAT
CGGGTCGCCG ACGGGCTCGC CGCGGAGCGG TTCGCGGCGG AGCTGGATCG CAATGACGTG
CAGTTGCGGC GCGGATGGCA CGGGAGTCTG TTGCCGCAGC TGGAGGAGCG GGTGGCGTCG
CATCCGTTGG ACGAGCGGCT GGCGGGGCAG CTCATGCTGG CGCGGTACCG GTCGGGGCGG
CAGGCCGAGG CGTTGGAGTA CTTCCACGCG TTGCGGCATC GCTTGGTGCG GGAACTGGGC
AGTGAGCCCG GGCCCGAGCT GGAGCGGTTG CATCAGCGGA TCCTGAAATC CGAGTCGAGT
CTGGACGTTC GGCGGGACGG TGACGGGGCG AGTGTCGCGG TGCCGCGGCA GCTGCCCGCG
CCGCGTCGGG GTTTCGTGGG GCGAACGGCG GAGATGGCGG CGCTGGACAG GGCCAGCGAC
GACGGCCAGA CCTTGTGGGT GGTGGCGGGA CCCGGCGGGA TCGGGAAGAC CTGGCTGGCC
GTCCAATGGG GGCACGAGCG GCGGGAACGG TTTCCGGACG GCCAGTTGCA CGTGAACCTG
CGTGGGTTCG ATCCGGCCGA GGCGCCGTTG GATCCGGAGT TGGCGATTCG GGGCTTGCTG
GTCGCGCTGG GGGTGGAGTC GCAGGCGATG CCGCCGGGCT TGGAGGCCAA GTCGGCGTTG
TACCGGAGTT TGCTGGCGGG CAAGCGGATG CTCGTCGTCC TGGACAACGC CCGGGACACG
CAGCAGGTGC TGCCGCTGTT GCCCGGCGGG ACCTCGGGTA CGACGATCGT GACAAGCCGG
GCGGACCTGC CCGCTTTGGT GACGACGCAT GAGGCGCTGC ACGTGGGATT GCGGCCGTTG
GACGATCCGG ACGCGTACCG GACCTTGGCC AAGCGGATGG GGACGGAGCG GATCGACGCT
GAGCCGGAGG CGGTGGCGGA GCTTGTCGCG CATTGTGCGG GGTTGCCGTT GGCGTTGGGG
ATCCTGGGGG TTCGCGCGGC GATCGATCCG GAGTTGTCAT TGGCGGTGTT GGCCAGGCAG
CTGCGGGAGG CGCGACTGGA TACTTTGGAT TCGGGGGAGT TGTCGGCCAG TGTGCGGGTG
GTTTTCGACA GCTCGATGAG CGTGCTGAGT TCGGATGCGG GGGTGTTGTT GTGTTTGCTG
GGGATCGCGC CGGGGGATGA TGTCGCGGTG GCCGCTGCGG CGAGCTTGGC GGGTATCGGG
CTGTCGCGGG CCGGGGAACT GTTGCGGGAG CTGGAGATCG CGCATTTGGT CGACGAGACT
GTTCCGGGGC GGTTTCGGTT GCATGATCTG ACTAAGACGT ATGCGGGTGA GCGGGCGGCG
GAGCTGGTGC CGGAAGCCGA TCGTGTTGAG GCGTTGGGGC GGTTGGTGGA CCACTACCTG
CACGCCGCGT TCGCGAGCGA GCGGCTGCTC AACCCGGGAC GGCCCGTCCT GGAACTCGAT
GAGATGCGCG GCGGGGCTGT CGTGACGGAC CCGGAAACCG CTTCGGAGGC GCGGGGCTGG
TTCGACGACG AACTGTCCAA TGTGATCGCG ATTCAGCGGT ACGCGGCCGA CAGCGGCTGG
GACGTCCCGG GATGGAAACT CGCCTGGACG ATGGACACCT ATCTGTACTC ACGCGGGTTG
GGACAGCTGT GGTCGCAGAG CTGGCGCGTC GCGCTGGAAT GCGCGGAGCA CAGCGGCGAT
GCGGCGGTGA CGATCGTGTG CCATCGTCGG CTTGGCAGTG TGTACTCCTT CGAGCGACGT
GACGCCGACT CGATCCACCA TCTTCGGCAA GCTTTGGTCC TGGGGGAGTC GAGCGGGGAT
CTGATCGAGC AAGGTCACGC CCACAACAAC CTGGCCCTCA CCTACAGCCG ATTGTCCGAA
TTCGCCAAGG TGGTCGAGCA CGCCGAACGC GCGGTCGTGC TGTACCGCGA GGCCGAATAC
CCGGCGTCGG AGATCTCCGC GCTGAACATC CTGGGCTGGG CCCTGTTGAA GCTCAACGAC
TTCGGCCGCG CCAGGGCTTA CGTGGAAACG GCGCTGGAGA CCTGTCACCG GAGCGGTGAA
CGCATGTTGC TGGGACGCGT CCACTCGACC CTCGCGGAGG TCTCGCAAGC GGAAGGCGAC
CTCGAAGCTG CGCTGCGGCA ATGCCGTCTG GCGATTTCGC TCTACGCCGA CAAGGACAAT
GCCGAGCTGA TCGAGGTTCT CGAATTCACG GGTGACGTGT TGCGTGACCT GGGACAGCTT
CGCGAAGCGC GGGAAGAGTG GCTTCGGGCC CGTGACCTGG CTAGCTCGCT GGGCCAGGAC
AGTCAGGCCG AATCCATCGA AGCCAAACTG GCCTCACTCC CCACCGCGAC TACCACCCCG
GGCTAA
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| Protein sequence | MEFRVLGAVE AVADGVTVDI GPASRRAVLA ILLVEVGRVV SVEQLIDRLW RDAPPRGARD
SLYSYLSRLR SGLGDGLIRR RSGGYVVTVD PVSVDLHRFR KLVGEARRST GDDESAELFE
AALRLWRGEA FEGLDVPWLH RVADGLAAER FAAELDRNDV QLRRGWHGSL LPQLEERVAS
HPLDERLAGQ LMLARYRSGR QAEALEYFHA LRHRLVRELG SEPGPELERL HQRILKSESS
LDVRRDGDGA SVAVPRQLPA PRRGFVGRTA EMAALDRASD DGQTLWVVAG PGGIGKTWLA
VQWGHERRER FPDGQLHVNL RGFDPAEAPL DPELAIRGLL VALGVESQAM PPGLEAKSAL
YRSLLAGKRM LVVLDNARDT QQVLPLLPGG TSGTTIVTSR ADLPALVTTH EALHVGLRPL
DDPDAYRTLA KRMGTERIDA EPEAVAELVA HCAGLPLALG ILGVRAAIDP ELSLAVLARQ
LREARLDTLD SGELSASVRV VFDSSMSVLS SDAGVLLCLL GIAPGDDVAV AAAASLAGIG
LSRAGELLRE LEIAHLVDET VPGRFRLHDL TKTYAGERAA ELVPEADRVE ALGRLVDHYL
HAAFASERLL NPGRPVLELD EMRGGAVVTD PETASEARGW FDDELSNVIA IQRYAADSGW
DVPGWKLAWT MDTYLYSRGL GQLWSQSWRV ALECAEHSGD AAVTIVCHRR LGSVYSFERR
DADSIHHLRQ ALVLGESSGD LIEQGHAHNN LALTYSRLSE FAKVVEHAER AVVLYREAEY
PASEISALNI LGWALLKLND FGRARAYVET ALETCHRSGE RMLLGRVHST LAEVSQAEGD
LEAALRQCRL AISLYADKDN AELIEVLEFT GDVLRDLGQL REAREEWLRA RDLASSLGQD
SQAESIEAKL ASLPTATTTP G
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