Gene Snas_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1851 
Symbol 
ID8883042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1940438 
End bp1942201 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510640 
Protein GI291299362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC GTCGTGACCC GCTGCTGCTC GCCGTGATCG CGCTGTTGGG CCTGAGCGGC 
TGCGGGGTCC CGTCCTCGGG GCCCTCCACC CAGGTGGACA AGGTGGAGCA GGACAGCGGC
AACGGCGACT CCTCCGACGT CGAGACCCTG GAGCCGTCCA CCAAGGAGAT CACCACGGTC
CGCAACTTCC TGGGCGCCGC CGCCGGTGAC GTCAACGGCC GCGACAAACG GCTGGGCCGG
TTCCTCAAGA CCGACGGCAA GCAGAAGTGG TCGGAGCCGT CGGAGGGCAT CCAGCTGGTC
CGCATCCCCA GCGACGGCGT CAAACGCGCC TCCGACGGGG ACTCCTACAG CGCCAAGGTG
ACCGCGAAGG GCACCATCGT CGGCGTCTAC GGCCAGAACG GCCAGGTCAA ACCCTGGTCG
GGCGACGACG AGTTCAAGCA GACCTTCGAG CTGGAGCGGG AACGTTCCAC CGACGTGTGG
CACCTGACCG AGGCGCCGCG GCAGGTGTAC CTCAGCGACG ACTTCTTCGC CAAGGGGTAC
CGGATGTCGC CGCTGTACTT CTCGGCGGCG TCGAGTCACG ACGACACCCT GGTGCCCGAC
GCCCGCTGGC TGCCCAAGGA ACTGATGGAC TCCGAGGCCC GGTACCCGCA GCTGACCGAC
TGGCTGCTGG GCGGGCCCTC CGACTGGATC AGCTCCACGG TGACCAGTGC GTTCCCGGAG
GGGACCTCGC GGGAGAAGGC GGTGACGGTC TCCAAGAGCG GCGAGCGGGT CACCGTCGAC
ATCTCGGTGG ACTCGGCCTC GCAACCGGCC AAGGACCGCG AGACCATGAG CGCGCAACTG
GCCTGGACCA TGGGATTGAG CTCCGACCAG ACCCTCAGCC TGTACGTGGA CGGCCAGGAA
CGGCTCACCC GCGAGGTCTC GGCCTGGTCG GACCGCGAGC ACACCCCTGA GGAACGCGAC
TCCGCCGAGG GACTGGCCTA CTTCATCAGC GACGGCGAGG TCGCCGCCAA CGAACCCGAC
GCCGAATACG TGGGCACCAA GGCTTCCGGG CTCAGCGAGG CGGTCATCAA CCGGGAGGGC
AACCGCATCG CCGTGGTGGC CGGCAAGTCC GGGCGGCAGC GGCTGCTGGT CGGCCCGGCC
GGTGACCTGG AGAAGGTGGA GAAGTTCAGC TCCCCGCACC TCGAAGATCC ACAGTGGCTT
GACGATGACA CCCTGCTGGT GCTCGACAAC GGCGCCCCGG TCACCGTGAA CATCAACTCC
GGCAAGCGAC AGGAACTGTC CATCGACGAG GAGCAGGGCG AGGTCTCCGA ACTCGCGCTG
TCTCCTGACG CCCGCCGGGT CGCCTACGTC GCCGAGGGCC GCGCCTGGCT GTCGACGGTG
CTGCCCGACG AGGACTCCAA ACCCAAGCTC GGCGACCCGG TCGCGGTGAC CGAGGCCGTC
ACCGACGTCG GTGACCTGGC CTGGAGCCGC GAGACCCACC TGCTGTTGAT CGGCGCGGTG
TCCGGCGAGG ACGCCTGGCT GTGGGAGGCG TCGATCGACG GCGCCTACCT GCAACCCCGC
GCCGGTACCA CCGGCGACAC CGCCCGCGCC GACGCGCTGG CGGTGCGCTG CAAACCCGCC
ACCGACCGCG GCACCAGTGA CCTGGCCGGT GACCCGGTGC TGTTGCAGAT CAACGGCATC
ATCCACCGCC TGTACACCGA CGTCTCCCCG GTGCAGGTCG GCAAGGAGGA CGCCGCGGGC
ATGGCCCCGT TCACGGCGCC TTAA
 
Protein sequence
MNRRRDPLLL AVIALLGLSG CGVPSSGPST QVDKVEQDSG NGDSSDVETL EPSTKEITTV 
RNFLGAAAGD VNGRDKRLGR FLKTDGKQKW SEPSEGIQLV RIPSDGVKRA SDGDSYSAKV
TAKGTIVGVY GQNGQVKPWS GDDEFKQTFE LERERSTDVW HLTEAPRQVY LSDDFFAKGY
RMSPLYFSAA SSHDDTLVPD ARWLPKELMD SEARYPQLTD WLLGGPSDWI SSTVTSAFPE
GTSREKAVTV SKSGERVTVD ISVDSASQPA KDRETMSAQL AWTMGLSSDQ TLSLYVDGQE
RLTREVSAWS DREHTPEERD SAEGLAYFIS DGEVAANEPD AEYVGTKASG LSEAVINREG
NRIAVVAGKS GRQRLLVGPA GDLEKVEKFS SPHLEDPQWL DDDTLLVLDN GAPVTVNINS
GKRQELSIDE EQGEVSELAL SPDARRVAYV AEGRAWLSTV LPDEDSKPKL GDPVAVTEAV
TDVGDLAWSR ETHLLLIGAV SGEDAWLWEA SIDGAYLQPR AGTTGDTARA DALAVRCKPA
TDRGTSDLAG DPVLLQINGI IHRLYTDVSP VQVGKEDAAG MAPFTAP