Gene Snas_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1846 
Symbol 
ID8883037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1935167 
End bp1936489 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510635 
Protein GI291299357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCGTCGACAC CGAGGTCCGG CAGCCGCAGC CCGAAGCGCC GCGCAAGCGG 
CCGCCGCTGC GTCGCCGTCA CCTGCTGATC CCGCTGGCCG CCGCCGCGGC GCTGATCGTG
TTCACCATCG TCGCCGCGTT CGTCGAGTCG CCGAGCCCCG GCTCCGACAG CTTCCTGTCG
CCGCGCGCCG CCGGCGGCAA CGGATCCTCG CAACTGGCCA AGAGCCTCGA GGAGAAGGAC
GTCACGGTGG ACCGGTTCAC CGACGCCGGT GACTCCTTCT TCGACGCCGC CTCCAGCGGC
GACACTACCG TGTTCATCCC GGCCCCCGAC TACCTCAACT CCTCCGAGAT CTCGCGGTTG
CAGGAAGCGG CCATCGCCGA GAACACCCGG GTGGTGTTCG TCGACCCGTC CCGGGACCTG
TTGGGCTCAC TGGGTTTGAG CGAGGCGGGC GCGCCGCGCA TCGCCCCCAA GGTCGTGGCT
CCGTCCGATG GCTGTGACCT GCCCGAGGCC GCCAAGGCCG GGGACGCGGG CATGCTGCGG
CAGGCCTACG CCGAGGCCAA GTCCAGCGGC GGGCTCGAAC TCGACCTGAA CTGGCGATTC
TGTTACGACG ACGGACTGGC CTGGACCGGG ACCGGCAGCA TGTCGTTCGT GGTCGCCGGG
GCCGCGGATC CGTTCACCGA CGAGTACTTC GGCGAGGCCG GGAACGCGGA GCTGGCCACC
GGGCTTTTGG GACAGCACCG CAAGGTGGTG TGGCTGGACA AGCATTCGCT GACCAAGGAA
CCGCCGCCCA GCGAGACCCT GCCCACGCCC GACGGCGACT ACACCCCGCC GCCGGACCCC
AGCCGCGACC CGATCGAATA CCCCAACCAG GGGCAGACCA ACCCGATCTA CGACGCCATG
CCCGCGTGGA TGTGGGCGAT GCTGCTCGGG GCGCTGGTGC TGGGCGTCCT GATGGCGCTG
TGGAAGGGCC GACGGCTGGG GCCGCCGGTC ACCGAACCGC TGCCGGTGAC GGTCCCGGCC
GCCGAGACCG TCCACGGCCG GGCCCGGCTG TACCGGCGCG CCCACGCCTA CACCGAGACG
CTGCGGGCGC TTCGTGCCGG TGCGCTGCAC CGGATCCGGC CGGTACTGGG CCTGTCCTCA
CAGGCCGGTG ACGCCGAGGT CGTCGAGGCG GTGGCGACGC GCACCGGCTG GCCGCGCGAG
CACATCACCG CGACGCTCTA CAGTACGCAA CCGACCAACG AAGACGAGCT CTACAACGCG
ACCCAGGCGA TCGACGCGCT GGTGTCGGCC GTGGAAAACG CGAGCCCACA AGGGAGTAAC
TGA
 
Protein sequence
MTAVVDTEVR QPQPEAPRKR PPLRRRHLLI PLAAAAALIV FTIVAAFVES PSPGSDSFLS 
PRAAGGNGSS QLAKSLEEKD VTVDRFTDAG DSFFDAASSG DTTVFIPAPD YLNSSEISRL
QEAAIAENTR VVFVDPSRDL LGSLGLSEAG APRIAPKVVA PSDGCDLPEA AKAGDAGMLR
QAYAEAKSSG GLELDLNWRF CYDDGLAWTG TGSMSFVVAG AADPFTDEYF GEAGNAELAT
GLLGQHRKVV WLDKHSLTKE PPPSETLPTP DGDYTPPPDP SRDPIEYPNQ GQTNPIYDAM
PAWMWAMLLG ALVLGVLMAL WKGRRLGPPV TEPLPVTVPA AETVHGRARL YRRAHAYTET
LRALRAGALH RIRPVLGLSS QAGDAEVVEA VATRTGWPRE HITATLYSTQ PTNEDELYNA
TQAIDALVSA VENASPQGSN