Gene Snas_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1842 
Symbol 
ID8883033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1930705 
End bp1931556 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003510631 
Protein GI291299353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC AGGTAGCGAT CATCGGTGCG GGCCTCATGG GCTCGGGCAT CGCACAGGTC 
GCGGCGGTCT CGGGCTGGAC GGTCACGTTG CGTGACCTCA CCGACGAGGC GACGGCGCGG
GGCGTGGCCA ACATCCGCGG CTCCCTGGAG AAGTTCGCCG CCAAGGACAA GATCAGCACC
GCCGACGCCG AGGCAGCGCT GGGCCGCATC ACCACCACCA CCGACCTGGA CGCCGCCGCC
GAGGCCGACA TCGTCGTGGA GGCCGTCTTC GAGCGCCTCG ACGTCAAACA GGACATCTTC
ACCGAGCTCG ACAAGATCTG TCGTGATTCG ACGGTGTTGG CCACCAACAC CTCGGCCATC
CCGATCACCC AGATCGCCGC GGTCACCTCG CGCCCGGAAT CCGTTGTGGG AACCCACTTC
TTCTCGCCGG TCCCGATGAT GAAGCTGTGC GAACTGGTGC GGGGCCTCAA GACCAGCGAC
GCCACCCTGG CCACCGCCCG CTCCTTCGCG GAGGAGATCG GCAAGACCTG CGTCGTGGTC
AACCGCGACG TCGCCGGTTT CGCGACCACC CGGCTCATCT GCGCCCTCGT CATGGAGGCA
GTGTCGCTTG TGGAGAACGG CGTCATCTCC GCCGAGGACC TGGACGTCGC CTGCAAACTC
GGTTTCGGCC ACGCGATGGG GCCGCTGGCC ACCACCGACC TGACCGGACT GGACGTGTTG
CGCCACGCGA CCGAGAACAT CTACAACGAC ACCGGCGACT CCAAGTTCTT CCCGCCGGAG
CTGCTGTCGC GCATGGTCGC CGCGGGCGAC CACGGCCGCA AGACCGGCAA GGGCTTCTAC
GACTACAGCT GA
 
Protein sequence
MAGQVAIIGA GLMGSGIAQV AAVSGWTVTL RDLTDEATAR GVANIRGSLE KFAAKDKIST 
ADAEAALGRI TTTTDLDAAA EADIVVEAVF ERLDVKQDIF TELDKICRDS TVLATNTSAI
PITQIAAVTS RPESVVGTHF FSPVPMMKLC ELVRGLKTSD ATLATARSFA EEIGKTCVVV
NRDVAGFATT RLICALVMEA VSLVENGVIS AEDLDVACKL GFGHAMGPLA TTDLTGLDVL
RHATENIYND TGDSKFFPPE LLSRMVAAGD HGRKTGKGFY DYS