Gene Snas_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1772 
Symbol 
ID8882962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1857459 
End bp1858256 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID 
ProductNLPA lipoprotein 
Protein accessionYP_003510562 
Protein GI291299284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.37046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.57709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA CGATAGCCAC GACGGTGATA GCCGGGGCCC TGGCCGCGAC GTCGTTGACC 
GCCTGCGCGG GCAGCTCCGA CACGCTCGTC GTCGGCGCCT CCCCGACCCC GCACGGTGAG
CTGCTGGAGT ACATCGACGA CAACCTCGCC GACAAAGAGG GCCTGTCGAT CGAGGTCAAG
GAGTTCACCG ACTACAGCCA GCCCAACCCG GCGCTGGCCA ACGGCGACAT CAACGCGAAC
TTCTTCCAGC ATGTGCCGTT CCTGGAGGAC TACAACTCCG CCGAGGACGC GAACCTGGTG
TCGGTAGCCG AGGTGTTCAC CGAGCCGCTG GGCGGGTACT CCAGCTCCAT CAAGGACGTC
AAGGACCTGA AGGACGGTTC CGAGGTGTCC ATCCCCAACG ACGCCACCAA CGGCGGCCGG
GCGCTGCACC TGTTGGAGGC CAACGGTTTG CTGAAGCTCA AGAAGGGCGC GGGCCTGGAG
GCCACCGAGT CGGACATCGC CGAGAACCCG AAGGACCTGA AGATCGTCCC GCTGGAGGCC
GCGCAGCTGC CGCGTTCGCT GGACGATGTG GACTTCGCGG TCATCAACGG CAACTTCGCG
CTGGAGGCCG ACCTCAAGCC CAAGAAGGAC GCGCTGATCC TGGAGGACGG CAAGGACAAC
CCGTACGCCA ACGTCCTGGT GGTGCGCGAG GAGGACAAGG ACGACGAGCA GGTCAAGAAA
CTGGCCAAGC TGTTGAACTC CGACGAGGTC AAGAAGTACC TGGCGAAGAA GTTCCCGAAC
TCGATCCCGG CGTTCTAG
 
Protein sequence
MKRTIATTVI AGALAATSLT ACAGSSDTLV VGASPTPHGE LLEYIDDNLA DKEGLSIEVK 
EFTDYSQPNP ALANGDINAN FFQHVPFLED YNSAEDANLV SVAEVFTEPL GGYSSSIKDV
KDLKDGSEVS IPNDATNGGR ALHLLEANGL LKLKKGAGLE ATESDIAENP KDLKIVPLEA
AQLPRSLDDV DFAVINGNFA LEADLKPKKD ALILEDGKDN PYANVLVVRE EDKDDEQVKK
LAKLLNSDEV KKYLAKKFPN SIPAF