| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1768 |
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| Symbol | |
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| ID | 8882958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1851419 |
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| End bp | 1854142 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003510558 |
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| Protein GI | 291299280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.523218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.689906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCC GGCTGCTGGG CGCCGTCGAG GCCCGGCACG AGGGCGAACG CATCGACTTC
GGACACTCAC GGCAACGCGC CGTGTTGGCG TTGCTCGCGG TCAACCCCAA CACGGCGGTC
ACCGCCGAGC GGCTGATCGA CGGCCTGTGG GGCGACGCGC CGCCGCAGCG CGCCCGCCGT
ACCCTGCACA GCTACCTGTC CCGGGTCCGC AAGCTGCTGT CCGTTGCCGC CGACGTCGAC
ATCGAACACC GCCACGGCGG CTACGTCCTG AGCATCCCGC CCGAGCGGAT CGACCTGCAT
CGGTTCCGGC AGTTGGTGTC CGGCGCCGAG ACGGTGGCGC AGTGGGACGA GGCCATGGCA
CTGTGGACCG GCGATCCCTT CGACGGTCTG GACTTCCCCG GCCTGGACGC GCTGTGCGGC
GGCCTGGAGA TCGAGTGGCT GACCGCCGAA CTGGACCGCA ACGACGTGCT GCTGCGCCAC
GGGCTGCACG CCCGCACGGT GCCCGACCTG CGCGTGCTGG CCGTCCGGTT CCCCTGGGAC
GAACGCATCG CCGCCCAGCT GATGCTGGCC CTGTACCGGG GCGGCCGCCA GACCGAGGCA
CTGGAGCACT ACGAACGACT GCGACGGGAA CTGGCCGAAC GCCTCGGCAG CGACCCGGGC
CCGCGACTGC GGGAACTGCA CCGCCAGATC CTCACCGCCG AAGCCGACTC CGAACCCGCC
GCAGCGCCGC CCTCGGCGAC GGTGCCCCGG CAGTTGCCCG CCGCCCCCCG CCGCTTCGCC
GGTCGCGCCG ACGATCTGGA AACCCTCGAC GCCACCGGCG ATCCGATCGC GGTGGTCACC
GGCCCCGGCG GCATCGGCAA GACCTGGCTG GTGCTGCGCT GGGCCCACGA CAACCTGGAC
CGGTTCCCCG ACGGCCAGCT CTACCTCGAC CTGCGCGGCT TCGACCCCCA CTCGGCGCCG
CTGCCGCCCG GCGTCGCGAT CCTCGGTCTG CTGCAGGGAC TCGGTGTCAA GGACGACGCC
ATACCCTCCA ACCTGGACGC GCAGATCGGC CTGTACCGCA GCCTGCTGGC CGACAAGCGA
ATGCTGATCG TCCTCGACAA CGCCCGCGAG TCCAGCCAGC TCACCCCGCT GCTGCCCGGC
GGCTCCACCT GCACCACCCT CATCACCAGC CGCCACGTCC TGCCCGCGCT GTCGGCCTCC
CACGACGCCA CCCGGGTCCG GCTCGACGTC ATGAAACCCG ACGACGCCCA CGCCGCCCTG
GCCGCCCACC TGGGAGCCAA CCGGCTGGCC TGTGAACCCG CCGTGGCCGC CGAACTCGTC
GACCACTGCG GCGGTCTGCC GCTGGCCCTG GGCATCATCG CCGCCCACGG CAACGCCCAC
CCCAACTTCC CACTGGAGAC GGTCGCGGCC GAACTGCGCG AGGCCACCAC CCGTCTGGAC
ACACTGGACT CCGGTGAGCT GTCCTCCAAC CTGCGCGCCG TCTTTGACAC CTCCCGCGCC
GCCCTCAGCC CCGAGGCCGC CGAGGTCTTC AACCACATCG GACTCATGTC GGCGGGTCGG
CTGCGCCTGG AAGCCGTCGC CAGCGTCGCC GGGCAACCCG TGGACCGCTG CAAGGCCCTG
CTGCGGGAAC TGGAGGAAGC CCACCTCATC GAGCAGTTCA AGCCGCACCG CTACCGCATG
CACGACCTCA TCCACCTGTA CGCCATGGAG GGCGCGCACG CCACCAATCC CGACAGCTCG
GCGGCATACG CCCGGCTGGT GGACCACTAC CTCTACAGTG CCCGGTCAGC CGTGGCGCCG
CTGGTCACGG GATCCAGTCC CATCACCATG GCCGAACCCG AGCCCGGAGC CGTGGTGCTG
TCGTTCACCG ACCGGGACGC GGCCTTCGAC TGGTTCGGCG AGGAACACCG CAACCTGCGC
GACGCGCAAC GCATCGCCGA AGGCCACGGC TGGAGCGACC GGGTCTGGCA GCTGCCGTGG
ATGATGCGGG TCCTGCACCA CCTCAGCTTC CACGCCGAGG AGGAGATCGA CATGTGGCGG
CGCGCCGCGA CGGCCACCGC CAACAATCCC GACACCACCG CGCGCGCCAT CGTCCACTGC
CAACTCGCCA AGGCACACGT GCTGCACGGC GACCTCGACG AGGTCGTCGG GCACGTCGAC
ATCGCGCTGG CGGTCGCCAC GGACGAGGCT CCCGTCGCCG TGTTCTCGGG CGTCGCCAAC
GCCCTGTCGG TGTACGCGCA GAAACAGGGC GACGCCAAGG CGGTCCTGCC GAAGCTGGCC
GTCGCGGAGG CGGCGTTGCG GCGCCGCGGC GACGACTTCG CGTTGGCGGT CGCGTTGAAC
ACCAAGTCAA TGGTGCTCAG CGAGCTCGGT GACGTGGACG CCGCGGTCGC GACCTGCGAG
ACGGCCCTGG AGCTGATCCG CGGCTCCGAG GAGGACCAGC TGCGGGCGGC CATCCTGGAC
TCCATCGGGG TCGCGCACCA GGCGGCCGAA CGCCACGACG TGGCGCTGGG GTACTTCCGC
GAGTCGCTGG AGCTGTTCAC GCGCGGTCCG TCGAAGGCCA TCCGGAAGAT GCCGCTGGAG
AACCTTGTGG ACACGTACCT GGCGCTGGGG GACCTGGACG GTGCCCGCGA GGCGGGGGAG
GAGCTGGTCG CGATCTACCT GAAGGAGCGG CACACCGAGG CGGTGGATCG GGTCCGGCGA
AAGCTGCGGG ACCACGCGGT CTGA
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| Protein sequence | MEIRLLGAVE ARHEGERIDF GHSRQRAVLA LLAVNPNTAV TAERLIDGLW GDAPPQRARR
TLHSYLSRVR KLLSVAADVD IEHRHGGYVL SIPPERIDLH RFRQLVSGAE TVAQWDEAMA
LWTGDPFDGL DFPGLDALCG GLEIEWLTAE LDRNDVLLRH GLHARTVPDL RVLAVRFPWD
ERIAAQLMLA LYRGGRQTEA LEHYERLRRE LAERLGSDPG PRLRELHRQI LTAEADSEPA
AAPPSATVPR QLPAAPRRFA GRADDLETLD ATGDPIAVVT GPGGIGKTWL VLRWAHDNLD
RFPDGQLYLD LRGFDPHSAP LPPGVAILGL LQGLGVKDDA IPSNLDAQIG LYRSLLADKR
MLIVLDNARE SSQLTPLLPG GSTCTTLITS RHVLPALSAS HDATRVRLDV MKPDDAHAAL
AAHLGANRLA CEPAVAAELV DHCGGLPLAL GIIAAHGNAH PNFPLETVAA ELREATTRLD
TLDSGELSSN LRAVFDTSRA ALSPEAAEVF NHIGLMSAGR LRLEAVASVA GQPVDRCKAL
LRELEEAHLI EQFKPHRYRM HDLIHLYAME GAHATNPDSS AAYARLVDHY LYSARSAVAP
LVTGSSPITM AEPEPGAVVL SFTDRDAAFD WFGEEHRNLR DAQRIAEGHG WSDRVWQLPW
MMRVLHHLSF HAEEEIDMWR RAATATANNP DTTARAIVHC QLAKAHVLHG DLDEVVGHVD
IALAVATDEA PVAVFSGVAN ALSVYAQKQG DAKAVLPKLA VAEAALRRRG DDFALAVALN
TKSMVLSELG DVDAAVATCE TALELIRGSE EDQLRAAILD SIGVAHQAAE RHDVALGYFR
ESLELFTRGP SKAIRKMPLE NLVDTYLALG DLDGAREAGE ELVAIYLKER HTEAVDRVRR
KLRDHAV
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