Gene Snas_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1744 
Symbol 
ID8882934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1829844 
End bp1831145 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content67% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510535 
Protein GI291299257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CACCCCTGCC CGCGCCCGCG GGCGCCCCCA TGAGCCGTAC TCGCCAGCTG 
GCCGCCGCCT CGGTCGGCAA CCTGGTCGAG TGGTACGACT GGTACGCCTA CTCGTTTTTG
GCCGTCTACT TCTCCAGCCA GTTCTTCCCC GAGGGCGGTG GGCCGCTGGT GCCGCTGCTG
AACACGTTCG CGATCTTCGC GGTCGGGTTC TTCATGCGGC CGGTCGGCGG TCTGCTGCTG
GGTTGGTTCG CCGACCGGTT CGGCAGGCGT TCGGCCCTGA CGTTGACGAT CACGCTCATG
GGTGCCGGTG GCCTGTTGCT GGCCGTCAGC CCGACGTACG CGCAGGTGGG TGTGCTGGCG
CCGATCCTGT TGGTGTTGGC GCGGTTGATC CAGGGCTTGT CGGTCGGCGG CGAGTTCGCC
GCGTCGACGA CGTTCCTGGT CGAGTCGGCC GGGCCGGGCA GGCGGGGACT GTTCTCCAGT
TTCCAGTACG TGTCGACGAC GACCGGGCAG TTGGCGGCGG CCGGGCTGGC CGCGCTGATG
GCCTCGCAGC TGTCGAAGGC CGACATGGAG GCCTGGGGTT GGCGGGTGGT GTTCCTCGTG
GGCGCCGTCG CCAGCATCGT GGGTCTGTGG ATCCGCAAGG GCGCCCACGA GACGCACCCC
GACGCGCAGG CGCTGCGCGA GGGCACCGTC AAGCGGCCGC ACATGTTCTC GTTCCTGACC
CGGTACCCCG GCAAGTCGCT GCTGATCATC GGGATCACGG TCGCGGGAAC GATCTCGTAC
TACACCTGGA CCGTGTACCT GCCGTCCTAC GCGGAGACCT CGGTGAAGTA CGACCCCAGC
AAGGCGCTGC TGGTCTCGAC GATCGCGTTG GCGTTCTTCA TCGTGCTGCA ACCGCTGGCC
GGGATGCTGT CCGACCGGAT CGGACGCAAA CCGATGTTGC TGACCTTCTC GGCCGGGCTG
GCGATCCTGA CGGTTCCGCT GTTGAACGCG GTGGACACCA GCTTCATCAG CCTGCTGTCG
GTGTCGCTGG TGGCGATGGT GTTCCTCAGC GGGTACACCG CGATCGCCGC GGCGGTGATG
GTGGAGATCT TCCCGGCCCG GGTGCGGGCG GCGGGTATCG GTTTCCCGTA CTCCCTGACC
GTCGCGCTGT TCGGCGGTAC CGCGCCCTAT GTGGGCACCT ATCTGTCCAG TCTCGAACTC
GGTTCCTGGT TCCCTTGGTA CATCGTGGTT CTGACGTTGG TGTCGCTGCC GGTGTACTTC
TTCCTGCGTG AGACCAAGGA CGACGAGCTC GACGTCGGCT AG
 
Protein sequence
MTAPPLPAPA GAPMSRTRQL AAASVGNLVE WYDWYAYSFL AVYFSSQFFP EGGGPLVPLL 
NTFAIFAVGF FMRPVGGLLL GWFADRFGRR SALTLTITLM GAGGLLLAVS PTYAQVGVLA
PILLVLARLI QGLSVGGEFA ASTTFLVESA GPGRRGLFSS FQYVSTTTGQ LAAAGLAALM
ASQLSKADME AWGWRVVFLV GAVASIVGLW IRKGAHETHP DAQALREGTV KRPHMFSFLT
RYPGKSLLII GITVAGTISY YTWTVYLPSY AETSVKYDPS KALLVSTIAL AFFIVLQPLA
GMLSDRIGRK PMLLTFSAGL AILTVPLLNA VDTSFISLLS VSLVAMVFLS GYTAIAAAVM
VEIFPARVRA AGIGFPYSLT VALFGGTAPY VGTYLSSLEL GSWFPWYIVV LTLVSLPVYF
FLRETKDDEL DVG