Gene Snas_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1727 
Symbol 
ID8882917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1815099 
End bp1815686 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content66% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003510518 
Protein GI291299240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.820065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATC GCAAACTGAA GGTCGCCGTG GGAGTCGGTG CTGTGGCACT GATCGCCGGA 
GGTGTCGCGG GAATCGCCGG TATCGCCGGT GCCGACCCGA CCAACAAGTC GGTCGAGTTC
GTCGACGGTT TCGGGAACAT CAACGACGAC TGGAATGACC ACGAGCGCGA GGCCGACGTC
CTTTGTGAGG ACTGCGACAA CTCCTCTGGG ACCGACCTGG TGGTGCTGTG GCAGTCGGTG
CTGGTCGCCG ACGGTTACCT GGCATCCGTC GCCGACATCG ACGGCGAGTT CGGGGCTGAC
ACCGCCGAGG CCACCGCCGA GTGGCAGGGC GACAACGAGC TCGACCCGAC CGGTGAGGTC
GACCAGGCCA CCTGGGCCAC CGCCGACGAC TTCCTGGAGC CGGGCGACGA CGGCGCGACC
GTCTCCTACG TCGGCACCGA CGAGGGTTCG GTCCTGTTCA CCCGCACCGA CGACCTGGAC
GGCGCCTACG CCCTTCAGTC GGTGACCAAC GGCGACGGCG AAGAGGTCCA GCCCGAGAGC
CAGGACGACC GCATCTGGTT GTTCGACAGC ACCATCAGCT TCGAGTAG
 
Protein sequence
MRNRKLKVAV GVGAVALIAG GVAGIAGIAG ADPTNKSVEF VDGFGNINDD WNDHEREADV 
LCEDCDNSSG TDLVVLWQSV LVADGYLASV ADIDGEFGAD TAEATAEWQG DNELDPTGEV
DQATWATADD FLEPGDDGAT VSYVGTDEGS VLFTRTDDLD GAYALQSVTN GDGEEVQPES
QDDRIWLFDS TISFE