Gene Snas_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1726 
Symbol 
ID8882916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1814381 
End bp1814977 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content66% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003510517 
Protein GI291299239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAATC GCAAGTGGAA AGTCGCCGTC GGCATCGGTG CCGCGGCGTT GATCGCCGGT 
GGTGTCGTGG GCGTGGCGGG TTTCGCCAAC GCCGAGAACC CGGCGCGGGC GGCCAAGTTC
GTCGACGGTT TCGGCAAGGT CACCGACGAC TTCAGTGACC ACGCCAAGGA GGTCGGCGCC
CTGTGCGACG GCTGCGGCAA CTCGCGCGGC ACCGACCTGG TGCTGCTGTG GCAGTCGATC
CTGGCCGCCG ACGGCTACCT GCCCGGCTCC GAGATCGACG GCTACTTCGG TGACAGGACC
GCCGAGGCCA CCAAGGAGTG GCAGTCCGAC CACGACCTCG ACTCCGACGG TCGGGTCGGC
AGCAAGACCT GGGCGGCCGC CGACGACAAC ATGAATGTGG ACAGTGACGG TTCCGTCTAC
TACTTCGGTG GTGACGAGGA ACTGGGCGGC TTCCTCACCT TCGCGCGTGA CGAGGACAAG
GGCAACTACG ACCTCATCAG GGTGGGCGTG TACGACGACG CCTCCTGGGA CGACACGAGC
GGAAGCAAGT ACCTCTACAT GTCCAAGGCC AGCAACACTC TGGTCGAAGA GGACTGA
 
Protein sequence
MRNRKWKVAV GIGAAALIAG GVVGVAGFAN AENPARAAKF VDGFGKVTDD FSDHAKEVGA 
LCDGCGNSRG TDLVLLWQSI LAADGYLPGS EIDGYFGDRT AEATKEWQSD HDLDSDGRVG
SKTWAAADDN MNVDSDGSVY YFGGDEELGG FLTFARDEDK GNYDLIRVGV YDDASWDDTS
GSKYLYMSKA SNTLVEED