Gene Snas_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1724 
Symbol 
ID8882914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1813106 
End bp1813702 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content66% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003510515 
Protein GI291299237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.824361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATC GCAAGTGGAA GATCGCGGCC GGGATCGGTG CCGCCGCACT GATCGTCGGC 
GGAGTCGCGG GCGTGGCCGG ATTGGCCAAC GCCGACCCGA CGGCGAAGTC CACGACCTTC
GTGGACGGCT TCGGGAACAT CAACGACGAC TGGAGCGACA ACCACCGCGA GGCCGGAGTC
CTGTGCGACG GCTGCGACAA CTCGCAGGGC ACCGACCTCG TCCACCTGTG GCAGGCGATT
CTGGCCGCCG ACGGCTACCT CACCGACGAG CAGATCGACG GCTACTTCGG TCCCGCGACC
GCCAAGGCCA CCAAGCAGTG GAAGGCCGAT CGCGGCCTGA CCGCCAACGG CCGGGTCGGC
AACGGTTCCT GGACCCTGGC CGACGACTAC CTCGAGCCGG ATCCCGAACT CGGCGATGAG
TACCCGATCT ACAACGGCGA GACCGACGGC AATGTCCAGT TCGGTCGCGC CACCGACGCC
ACCGGGGCGT ACCGGATGAA CGTCGTGGTC ACCTCCGAGG GCTACGAGAT GTTCAACAGT
TCCTACGAAC AGGGCGTCCA GCTGTTCGAG GAAACCGTCA CCTGGACCAC CGAATAA
 
Protein sequence
MRNRKWKIAA GIGAAALIVG GVAGVAGLAN ADPTAKSTTF VDGFGNINDD WSDNHREAGV 
LCDGCDNSQG TDLVHLWQAI LAADGYLTDE QIDGYFGPAT AKATKQWKAD RGLTANGRVG
NGSWTLADDY LEPDPELGDE YPIYNGETDG NVQFGRATDA TGAYRMNVVV TSEGYEMFNS
SYEQGVQLFE ETVTWTTE