Gene Snas_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1718 
Symbol 
ID8882908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1807837 
End bp1808688 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510510 
Protein GI291299232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.771633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.106816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCAC AGCCTTCCGA GGTCGACAGC GACGACACCG CCACCGAACC GCAGTGGCAC 
GACTACGTCG AACAGTCGCT GCTGCCGCAC TGGCGCCGTC AGGCCGAGGC GGCCTACCGC
GCCATCCGGC GGGTCACCCG GGCCGAAGAG GCCACACTGG ACTCACTGTT GCGGGCGATC
GGCGCCGAGG GCGGCGAGGC GGTCCGGTCC CGGCTGGAGC GGGCCCACTT CCCCGACGGC
GGTTACGACG CCCTGATCCT GACCGCGGCC CTCGACAGTG GAGCCGTCCG GATCACCGCG
GACTGGGACA GCGCGACGGT GCTCGAGACA CCCGACGGGA CCGGCTTCGA CCCCGGCGTA
CTGGCCGGAG CGCTGGCCAA GGCCGACCGC GCCTCGGTGC CTGACGTGCT GGGCGGCCTG
ACCAAGGCGG GCATCGACCT GGAGCGGGCC AGCGGCGGCA CCACCGTCGC CGACGCCGAC
ACCGCCCGCG CCAAGGGGGC GCTGGCCAAC ATGAAACTGG ACGGCCGACC GCACGACCTG
GTGGTCACCG ACGAGGGACT GCTGTTCCTG GGCTGCCCCA AGGCCACCGA CGACGGCGAG
AAGCGACTGC GACTGCTGCT CACCGCCGCC GACGGCGTCA AGGGACTGGC GTCCCGCCCC
GACGCCCGCT GGCTGCCCTT CGAGGAGTTC AGCCGGGTCC GCATCCTGAA ACACAGTCCG
ATCCGGGCCA TGGTCACGCT GCACGACGGC ACCGAGCACG ACTTCGGCTG GAGCTGGGCC
GGGGAGCAGA TCGGCGCGTC CGACAATCTG CTGGACGAAG TACTGTCCGA TATGGCCCAG
CGGCTGCGCT GA
 
Protein sequence
MPPQPSEVDS DDTATEPQWH DYVEQSLLPH WRRQAEAAYR AIRRVTRAEE ATLDSLLRAI 
GAEGGEAVRS RLERAHFPDG GYDALILTAA LDSGAVRITA DWDSATVLET PDGTGFDPGV
LAGALAKADR ASVPDVLGGL TKAGIDLERA SGGTTVADAD TARAKGALAN MKLDGRPHDL
VVTDEGLLFL GCPKATDDGE KRLRLLLTAA DGVKGLASRP DARWLPFEEF SRVRILKHSP
IRAMVTLHDG TEHDFGWSWA GEQIGASDNL LDEVLSDMAQ RLR