Gene Snas_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1714 
Symbol 
ID8882904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1804205 
End bp1804990 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510506 
Protein GI291299228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0835066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.178901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA ACCTGGTCGA CATCGGCCGC AGCCTGTTGC CCGCCCCCAT CGCCGACCGC 
TGGCTGTCCC TGCTGCGCCC GGGGATCCGC CTCAAACACG CCACCGGCGC CGACCCCGTC
GTCGGCTGGT TGGGCGGCGA CCCGGCGCTG CCGCCCGACG AACCGTGGCC CACCGACGCG
GCGGGCGCGC CGCTGCACCA TCTGATGAGC CTGGACCTGG CCATCCTGCT GCGCATCGAC
TTCGACCTGC CCGGCGACGG GCTGCTGGAG TTCTTCTGCG ACGGGCCGTC CGGCTCGCTG
GGCCGGGTCC GGTACTTCCC GGCCGCGTCG GCGGCGGTGC CCCGCGCGGC CCCGGCCGGG
ACCGAGCAGC CGTTCACGCG GGTCGCGTTG ACCTCCGTGA TCGAACTGAC CTCGCCCGAC
TACGACCATT CCTACCTGCA CGCCATCGAA GCCGACCTCG GCGACGATGA CACCGGCGTG
CTCGACAACG ACGCGTTCTG GGACCTGGTC GACAAGACCC CGATCCCCAG TCACCGGGTC
GGCGGCTACG GCCGCGACAT CCAGTACGCC GCCGACTTCG CCCCCAGTTC GACCCCCGTC
GAGGTTCCCG GACCCGACGG CCCCCGCACC GACACCACCC TGCCGCTGCT GCTGGCCCAG
ATCGACACCG ACTCCGCCGC CGGGATCGGC TGGGGCGACG TCGGCACATC ACTGTGGACG
ATCACCCGCG AGGACCTGGC GGCCCGCAGG TTCGACGATG TCGACTTCCA CTGGAGCTGT
AGTTGA
 
Protein sequence
MTDNLVDIGR SLLPAPIADR WLSLLRPGIR LKHATGADPV VGWLGGDPAL PPDEPWPTDA 
AGAPLHHLMS LDLAILLRID FDLPGDGLLE FFCDGPSGSL GRVRYFPAAS AAVPRAAPAG
TEQPFTRVAL TSVIELTSPD YDHSYLHAIE ADLGDDDTGV LDNDAFWDLV DKTPIPSHRV
GGYGRDIQYA ADFAPSSTPV EVPGPDGPRT DTTLPLLLAQ IDTDSAAGIG WGDVGTSLWT
ITREDLAARR FDDVDFHWSC S