Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1708 |
Symbol | |
ID | 8882898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1799029 |
End bp | 1799667 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003510500 |
Protein GI | 291299222 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.243048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCA TGCCAGGGTC TGAGGGCTTC GAGCCCGAAT CGGAGCGTGT CACGCGTCAG TTGCGGGACG ACATTCTCGA CGGTGTTCGC GCGCCCGGCA GTCGGCTGGT CGAGCGGGAG CTCGGGGCCG AGTTGGGGGT GAGCCGGTTG CCGATCCGGG ACGCGCTCAA GACGCTCGTG GGTGAGGGGC TGGTGGTTCA GCGGCCGCGT ACCTGGGCGG TGGTGCGGGA GTTCACGCCG TCGGACATCG CGGATCTGGG TGAGGTGCGG TCGGCCCTGG AGGTGCTGGC GTTTCGGTTG GCCGCCGAGC GGCGGAGCAA GGCGGGGCTG GACCGGTTGC GGGCGGACCT GGACGCCGAG TTGGCCGCCG CGCGCGACGG GGACGCCGTG GCGGCGCGGC GGGCCGCCGC CGATTTTCAT CAGACCGTGG TCTCGTTGGC CGCCAACGAG TTGCTCAGTG AGTTGGAGCA GACCCTGCGC AGCCGGATGC GGTGGTTGCT GGGGCAGCAC GATGACCTGC TCGGGGTCGC GAACGAGCAC GAGGAGTTGT ACGCGGCGGT GGCACAGCGG GACGCGGCCC GGGCCGAGGA GCTCGCGGTG CGGCACGCGG CCAATGACCG GTGGCGGCGA CCCCGGTAG
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Protein sequence | MSSMPGSEGF EPESERVTRQ LRDDILDGVR APGSRLVERE LGAELGVSRL PIRDALKTLV GEGLVVQRPR TWAVVREFTP SDIADLGEVR SALEVLAFRL AAERRSKAGL DRLRADLDAE LAAARDGDAV AARRAAADFH QTVVSLAANE LLSELEQTLR SRMRWLLGQH DDLLGVANEH EELYAAVAQR DAARAEELAV RHAANDRWRR PR
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