Gene Snas_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1708 
Symbol 
ID8882898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1799029 
End bp1799667 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003510500 
Protein GI291299222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.243048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA TGCCAGGGTC TGAGGGCTTC GAGCCCGAAT CGGAGCGTGT CACGCGTCAG 
TTGCGGGACG ACATTCTCGA CGGTGTTCGC GCGCCCGGCA GTCGGCTGGT CGAGCGGGAG
CTCGGGGCCG AGTTGGGGGT GAGCCGGTTG CCGATCCGGG ACGCGCTCAA GACGCTCGTG
GGTGAGGGGC TGGTGGTTCA GCGGCCGCGT ACCTGGGCGG TGGTGCGGGA GTTCACGCCG
TCGGACATCG CGGATCTGGG TGAGGTGCGG TCGGCCCTGG AGGTGCTGGC GTTTCGGTTG
GCCGCCGAGC GGCGGAGCAA GGCGGGGCTG GACCGGTTGC GGGCGGACCT GGACGCCGAG
TTGGCCGCCG CGCGCGACGG GGACGCCGTG GCGGCGCGGC GGGCCGCCGC CGATTTTCAT
CAGACCGTGG TCTCGTTGGC CGCCAACGAG TTGCTCAGTG AGTTGGAGCA GACCCTGCGC
AGCCGGATGC GGTGGTTGCT GGGGCAGCAC GATGACCTGC TCGGGGTCGC GAACGAGCAC
GAGGAGTTGT ACGCGGCGGT GGCACAGCGG GACGCGGCCC GGGCCGAGGA GCTCGCGGTG
CGGCACGCGG CCAATGACCG GTGGCGGCGA CCCCGGTAG
 
Protein sequence
MSSMPGSEGF EPESERVTRQ LRDDILDGVR APGSRLVERE LGAELGVSRL PIRDALKTLV 
GEGLVVQRPR TWAVVREFTP SDIADLGEVR SALEVLAFRL AAERRSKAGL DRLRADLDAE
LAAARDGDAV AARRAAADFH QTVVSLAANE LLSELEQTLR SRMRWLLGQH DDLLGVANEH
EELYAAVAQR DAARAEELAV RHAANDRWRR PR