Gene Snas_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1705 
Symbol 
ID8882895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1796634 
End bp1797590 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510497 
Protein GI291299219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.599854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.18032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCTG GACACCTCGC CCGCATCGAA CGGGCCGCCG GGGTCGACGG ACTCACCGAC 
ATCCTGTCCG ACCGTCTGTC CCCCAGCGAC CTGCGCTCGC TGCTTTTGGA AGTGCACCGC
CGCCGGGCCG CCGCCGTCAC CCCCGCCCAG CTGCTGCGGC AGTACCAGCG CGACCGCTTC
AGCGAACCCA GCGACCTCAG CCTCGACGAC CTGCACGCCC TCGACGCGCT CGTGCTGCCG
CGGCTGGCGG CGTCGGGATA CGAGGCCGTC GCGCTGTCGC CGGTGTGCCC GCTGGGAACC
AACTCCGTGG TGTCCACTGT GCCGCAGAAC AACGTCGTCA CCACCGGCCG CGGCACCGAG
GTCATCGCCG ACGCCACCAA CGTGCTGGCG CTGGAATGCG CCACCCGCCG CCAGTCCGCG
GCCGGCAGCA CCGACGTCGT CCGGCTGGCC GCCTCACAAC GCGTGGTTCG GGGACAACCC
ATACAGGGCA GGGGACTCAG TCCGCACTTC AAGCTGCTGG CCCTGTGCAC GGCGGGCCGC
GACACCGGCG GCTTCGGCTT CGAGACCACC GCGCTGACCG AGCAGCTGAC CATTCAGCTG
CGGCTGCTGG AATCCATGGC CCGCGACGGA TACCACCTCA ACGACGTCGA GGTGTCGCTC
ACCGACCTGA ACGGCGGAAC CCGCAAGCCC GTACTGGACT CGCGGGTGTT CGCGCCGTTG
GCCGAGGCGT TTCCCGAGGT CCGGTTCGGC TACGACGACG ACCGGACCTC GGGGACCAAC
TACTACACCG ACGTCAGCCT GGCCGTGTCC GCCCGCGACG CCCGGGGAGA GCGGATCACG
TTCTCCGACG GCGGTTTCAC CACCTGGACC CGGCAGCTGC TCGGCAACGC CAAGGAGCGG
CTGCTGATCG GCGGCCTCGG CCTGGAACTG ACGCACCGGC TGTTTCGGGA CGGCTGA
 
Protein sequence
MESGHLARIE RAAGVDGLTD ILSDRLSPSD LRSLLLEVHR RRAAAVTPAQ LLRQYQRDRF 
SEPSDLSLDD LHALDALVLP RLAASGYEAV ALSPVCPLGT NSVVSTVPQN NVVTTGRGTE
VIADATNVLA LECATRRQSA AGSTDVVRLA ASQRVVRGQP IQGRGLSPHF KLLALCTAGR
DTGGFGFETT ALTEQLTIQL RLLESMARDG YHLNDVEVSL TDLNGGTRKP VLDSRVFAPL
AEAFPEVRFG YDDDRTSGTN YYTDVSLAVS ARDARGERIT FSDGGFTTWT RQLLGNAKER
LLIGGLGLEL THRLFRDG