Gene Snas_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1702 
Symbol 
ID8882892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1793551 
End bp1794867 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content68% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510494 
Protein GI291299216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0466104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGAT GCCGAAATTC GGTATACCAT TTCGCGGTGC CCAGGGGACT GACGACCGAG 
GACCCGCCCC AGCCGTCCGC CACCGGACCG TCGCGCGCCA TCGTGTCGCT GCGGGCCAGC
CCGCGGTTTC GGTTTTTGTG GGTGTCGAAC ATCTTCTTCT TCGGCGGCAC CTGGATCCAG
ACGCTGATCC TGGGCTGGCT GGTCTTCGAG ACCACCGACT CCGAGCTGCT GCTGGCGATC
TTCACCGCCG TGCGGTTGAC CCCGATGCTG CTGGGGCCGA TCGCGGGGGT CTTGTCCGAC
CGCTACGACC GGGTTCGGCT GCTGACGGGC GCGTGTCTGC TGGCGCTGGG AACCGTTGTG
GCACTGGCGA CGTTGACGTC GCTGGGGATG GCCCCGTACT GGGTGGTGCT GTTGGGTGGG
CTGATCATCG GGTTGGCGCA CTCGCCGTCG CAGCCGGCTC GTTCGTCCCT TGTGGCTGAG
CTGGTGGGGC CGGAGAACCT CAGCAACGCC AACGCGCTCA ACTCGATGGC CATGAGCCTG
CCCCAGGTGG TGGGCCCCGC GATCGGGGGT GCGCTCATCA GCGCGTTGGG CGCGTCGTGG
GCACTATGGA TCTCGACACT GTGGTACGTC GTGTCGCTGC TGATGCTGCT TCCGTTGCGG
GGCAGTGGAA GGGCGGCAGC GGTCGCTCAC GACGGGGTGT TGGCGATGCT GACCGGCGGT
GTGCGCAGCA TCCTGCGCAA CCGTCTCGCG GCGACCGTCC TGGGGATCAC CGTGGTGGCC
AACATTCTGT TGTGGCCGAT CTACCAGTCC TTCATGCCGG TGTTCGCCAA GTCCACGCTC
GGCCTGGACG CGGCGGGCCT GGGCTGGTTG TTGACCTGCA ACGGTGTCGG CGGACTGGTC
GGGTCGATCG TCATCGCGGC GATGGGCGAC TTCCGGTTCA AGGGCGGCGT GTTCGTGTTC
GGCACCGCGC TGTGGGGCGG GCTGTGGTCG CTGTTCGCGT TGTCGGCCAA CGTACCGCTG
TCGTTCGCGC TGCTGGCCGG GATCGGGGTG GCCAGCTCGT TCTTCGGGGT GCTGCAGACG
ACCCTGCTGC TGTTGACCAC CGAACCGGCG GTGCAGGGCC GGGCGCTGGG GATCCAGGAG
CTGGCCATCG GCGTGATGCC GATCGCGGCG CTGGGCCTGG GCGCGATCGC CGAGGTCGCC
GGGATCGGCG CGACCACCTT CGTCAGTGCG CTGCTGCTGG TCGCGGTCAT GCTCGTGGTG
GCGGTGCGGG TGCCGCTGTT GTTGCGGTTC AGCGGAACCC GGGCTGTCAG ATCCTGA
 
Protein sequence
MSRCRNSVYH FAVPRGLTTE DPPQPSATGP SRAIVSLRAS PRFRFLWVSN IFFFGGTWIQ 
TLILGWLVFE TTDSELLLAI FTAVRLTPML LGPIAGVLSD RYDRVRLLTG ACLLALGTVV
ALATLTSLGM APYWVVLLGG LIIGLAHSPS QPARSSLVAE LVGPENLSNA NALNSMAMSL
PQVVGPAIGG ALISALGASW ALWISTLWYV VSLLMLLPLR GSGRAAAVAH DGVLAMLTGG
VRSILRNRLA ATVLGITVVA NILLWPIYQS FMPVFAKSTL GLDAAGLGWL LTCNGVGGLV
GSIVIAAMGD FRFKGGVFVF GTALWGGLWS LFALSANVPL SFALLAGIGV ASSFFGVLQT
TLLLLTTEPA VQGRALGIQE LAIGVMPIAA LGLGAIAEVA GIGATTFVSA LLLVAVMLVV
AVRVPLLLRF SGTRAVRS