Gene Snas_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1683 
Symbol 
ID8882873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1774600 
End bp1776813 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content67% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003510476 
Protein GI291299198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.356062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA ACCGAGTAAA GGCCACCGGT GTCGCCCGGT GGAGCATCCG CCATCCATGG 
TGGGCGATGG GACTGTGGCT GGCCTTCGTC GTCGCCGCCT CGGTGGGCGG CGGCATGTTC
CAGGTGCAGC AGGCCGAGCC CAAGGAGATA GCCGTGGGCG AGTCCCGCGA GGCCATCGAA
CTGCTGGAGC AGGCCGACTT CGAGGAACCG CCCGCCGAGA TCGTCCTGAT CACCGCCGAC
TCCGCCTGGG ACGACGAGGA TGCCGCGCAG GCCGCCAAGG AGGTGACCGA ACGACTGGAT
GACCTCGACG AGGTCAAGGA AGTCCTCCCC GCCATCGGAT CCACCGAGAC CGACGCGCTG
TTGCTGCCCA TCACGTTGAG CGGTGACTCC GACGTCGCCG ACGAGAAACT CGACGCGCTG
CGCGCCGAAG TGGACGCCGT CGCGAAGGAC TATCCGCAGT TGCGGTTGGA GACCGCCGGG
GAGTTCAGTC TCACTGCCGA CATCATGGAC ATGGTCAATG AGGACCTGGG TGTCGCCGGG
ATGGTGTCGA TCCCGCTGAC GCTGGGGATT CTGCTGTTGG CCTTCGGCGC GTTCATGGCC
GCGGGTGTGC CGTTGCTGTT GGCGTTGACC GCCGTCGGTT CCGCGACCGG GTTGTGGGCC
GTGGCCTCGC AGGTGATTCC CGACAACGGT TCGGCGCAGC ACTTGATCCT GTTGATCGGG
TTGGCCGTGG GTGTCGACTA TTCACTGTTC TATTTGAAGC GGGAGCGCGA GGAACGGCAG
AACGGTGCCT CGCACGTCGA CGCGGTGGCC ATCGCCTCGG CCACGTCCGG GCGTGCCGTG
TTGGTGTCGG GTTTCGCGGT GTTGGTGTCC ATGGCCGGGC TGTACCTGGC CGGGGACGCG
ATCTTCAACG CGTTGGCGAC CGCTTCGGTG CTGGTCGTGG CCGTGGCCGT GCTGGGTTCG
ATCACGGTGC TGCCCGCCGT GTTGACGAAG CTGGGCCGCG CCGTGGACCG GCCCCGGGTT
CCGTTGCTGT GGCGGCTTTC CAACAGTGGT GGTTCCCCGA AGGTGTGGCC GAGGCTGCTG
CGCCCGGCGC TGCGGTTCCC CAAGACGACG CTGCTGTTGA CGCTGGTGGC GATGGCCGCT
TTGGCCTGGC CCGCGATGGA TCTGGAACTG AAGAACTCCA GTCTGGACGA CTTCCCCGAC
GACACCGTGG TCGCCAAGAC CTACGACCGG GTCGTGGACG CGTTCCCCGA ACAGGGCAAC
AGTCACCAGA TCGTCGTGCG GGCCGACGCC GACGACGCCG GGGCGGTTCG TGACGCGCTC
ACCGAGCTGG CCGCCGACGT GCGCGATGAC GACCTGTTCT CCGCCGAGAA CGTGGTGCCG
CCGAGCACCT CCGACGACGA CACCGTCACC AAGATGAACC TGGCCATCCC CTACAGCGAC
TCCGATCCCG AGGCCAAGGA ATCGCTGGAC CTGTTGCGGG ACAAGCTGGT GCCCGATGCG
CTGGCCGACG TCTCCGGCGC GAAGGCCGTC GTCGGCGGCG CGGTGGCGCA GAGCTATGAC
TACGTCGACC ACCAGTGGGA CAAGATGCCG CTGGTCATCG GGTTCGTCAT GCTGCTGACG
ATGGTCATGA TGGCCGTCGC GTTCCGCTCC GTCGTGGTGG CGGTGGTCGC GGCGCTGCTC
AACACGCTGT CGGCCTTGGC GGCCTTCGGT TTGCTGGTGC TGGTGTTCCA GAAGACCTGG
GCCACCGAGT TGCTGGACTT CAAGTCCAGC GGCGCCATCA TCAGCTGGAT CCCGCTGTTC
CTGTTCGTGA TCCTGTTCGG ACTGTCGATG GACTACCACG TGTTCGTGGT CAGCCGGATC
CGCGAGGCGG TGGCGGGCGG CATGGGCACC AAGCAGGCCA TCGAGTACGG GCTGTCCCGC
ACCGCCGGGG TGGTGTCCTC GGCCGCGATC GTGATGGTGT TCGTGTTCGC GGTGTTCGCG
CTGCTGCGGA TGGTCGAGAT GAAGGAGATG GGCATCGGCC TGGCCGCGGC CATCCTCATC
GACGCGACCG TGGTGCGGAT CCTGTTGCTG CCGTCGATCA TGGCGCTGCT GGGCCGGGCC
AACTGGTGGC CGTCCAAGCT GTCGCGCAAG CGGCCGGTGG GTGACTTCGA CACCGCGCCG
GCACCGCTGG CGGCCGTCGA GCGAACCCCT GCGGCCAGCG GGTTCCGGCA CTGA
 
Protein sequence
MSGNRVKATG VARWSIRHPW WAMGLWLAFV VAASVGGGMF QVQQAEPKEI AVGESREAIE 
LLEQADFEEP PAEIVLITAD SAWDDEDAAQ AAKEVTERLD DLDEVKEVLP AIGSTETDAL
LLPITLSGDS DVADEKLDAL RAEVDAVAKD YPQLRLETAG EFSLTADIMD MVNEDLGVAG
MVSIPLTLGI LLLAFGAFMA AGVPLLLALT AVGSATGLWA VASQVIPDNG SAQHLILLIG
LAVGVDYSLF YLKREREERQ NGASHVDAVA IASATSGRAV LVSGFAVLVS MAGLYLAGDA
IFNALATASV LVVAVAVLGS ITVLPAVLTK LGRAVDRPRV PLLWRLSNSG GSPKVWPRLL
RPALRFPKTT LLLTLVAMAA LAWPAMDLEL KNSSLDDFPD DTVVAKTYDR VVDAFPEQGN
SHQIVVRADA DDAGAVRDAL TELAADVRDD DLFSAENVVP PSTSDDDTVT KMNLAIPYSD
SDPEAKESLD LLRDKLVPDA LADVSGAKAV VGGAVAQSYD YVDHQWDKMP LVIGFVMLLT
MVMMAVAFRS VVVAVVAALL NTLSALAAFG LLVLVFQKTW ATELLDFKSS GAIISWIPLF
LFVILFGLSM DYHVFVVSRI REAVAGGMGT KQAIEYGLSR TAGVVSSAAI VMVFVFAVFA
LLRMVEMKEM GIGLAAAILI DATVVRILLL PSIMALLGRA NWWPSKLSRK RPVGDFDTAP
APLAAVERTP AASGFRH