Gene Snas_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1682 
Symbol 
ID8882872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1773736 
End bp1774539 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID 
ProductEndonuclease I 
Protein accessionYP_003510475 
Protein GI291299197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.497989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGG AATGGATGCC AATGCGCCGG ACTCGCACAC TGGCAGCGCT CGCCGGGGCG 
GCAGTAGGGG CTACAGCCCT TATTCTCGTC CCGCTGGCCA CAGCCCAGGG TCATGACGCC
TACGAACCCC CGGACGGCTA TTACGACGCC GTCGAAGGCA TGACGGGAGA AGAACTCAAA
GCCGGTCTCA ACGACATCAT CAGCAACAAC GAGCAGTTGT CCTATGATGA GGCCCGAGAC
GCTCTCAAGG AGACAGACGC CGACCCGGCC GACCCCAGCA AGGTCGTGCT GATCTACAAT
GGCACTTCGG TCCCCGCCGA CGACTACGAC CAATGGAACC GCGAACACGT GTGGGCCAAG
AGTCACGGAG ACTTCGGTAC TGACATCGGC CCCGGCACCG ATGTTCATCA CCTTCGTCCC
GCCAACGCGG TCGTCAACTC CACCCGCAAC AACCTCGACT TCGACATGGG TGGTGAGGAA
GTAGCGGATG CCCCCGGCAA CTTCTACGAC TCCGACTCCT TCGAGCCCCG TGACGAGGAC
AAGGGCGACG TCGCCCGCAT GATCCTCTAC ATGGCGGTTC GCTACGAGGG CGAGGACAGC
TACCCCGACC TGGAGCCCAA CGACGAGGTC GAGAACAACG AGAAGCCGCT CCACGGCCGC
CTGTCGGTCC TGAAGCAGTG GAACGAGCAG GACCCGCCGA GCGACTTCGA GAAGAACCGC
AACGAGGTCA TCTTCGAGAA GTTCCAGAAG AACCGGAACC CGTTTATCGA CCACCCCGAG
TGGGTAGGCG AGGTTTGGGC CTAA
 
Protein sequence
MGKEWMPMRR TRTLAALAGA AVGATALILV PLATAQGHDA YEPPDGYYDA VEGMTGEELK 
AGLNDIISNN EQLSYDEARD ALKETDADPA DPSKVVLIYN GTSVPADDYD QWNREHVWAK
SHGDFGTDIG PGTDVHHLRP ANAVVNSTRN NLDFDMGGEE VADAPGNFYD SDSFEPRDED
KGDVARMILY MAVRYEGEDS YPDLEPNDEV ENNEKPLHGR LSVLKQWNEQ DPPSDFEKNR
NEVIFEKFQK NRNPFIDHPE WVGEVWA