| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1680 |
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| Symbol | |
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| ID | 8882870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1771377 |
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| End bp | 1772336 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003510473 |
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| Protein GI | 291299195 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00886314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.186042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA TCGCGGTCCT GGCCTTCGAC ACCGTGGTCG GCTTCGAGCT GGCCATGCCC
GGTCAGATCT TCGGCTCCGC CCGCTCGGCG GACGGCGAGG CGCTGTACCG GGTCCGGATC
TGCGCCCCGA GTCCCGACAT CCAGGTCAAC GCCGCCGGTG GCCCGTCCCA CCGGATGCTG
GCCCCGTTCG GGCTCGACGG TCTGGACGGC GCGGGCACCG TCATCGTCCC GGCACACGAA
ACCGACGACA TACCGCCGGT CATCCTGGAC GCGTTGCGCC GCAAGCACTC CGACGGCGCC
CGCGTCGCCT CCATCTGCAC CGGCGCCGAG GTCCTGGCCG CCGCCGGGCT GTTGGACGAC
CGTCCGGCCG CCACCCACTG GCGGCACGCC GACCGCATCG CGCGCCGGTT TCCCCGGGTG
CGGTTCGACG CCTCGGTGCT GTACGTCGAC GACGGCCGCG TGCTCACCGG TGCCGGGGTC
AGCGCCGGCA TCGACCTGTG CCTGCACCTG ATCCGCCGCG ACCACGGCGC CGCCGTCGCC
GCCGAGGTCG CGCGGCGCAT CGTCATGGCC CCCGAACGCG GCGGCGGCCA GGCCCAGTTC
ATCCCGTGGG ACAACGATCC CGGCGACGAC CGGCAGCTGG CCGACACCAT GACCTGGGCC
CGCGCGCGGC TGCACGCGCC GCTGACCCTC GACGAGCTCG CCGCGCACGC CCGCGTCAGC
GTCCGCACCC TGATCCGCCG GTTCCGGGAA CAGACCTCGC AGACCCCGTT GCAGTGGCTG
ATCGGGCAGC GGGTGCAGCG GGCCCGGGAA CTGCTGGAAA CCACCAATCT GGACATGGAG
GACATCGCCC GGCGCTGCGG TTTCGGCGTC GCCACCGCGC TGCGGCACCA GTTCCGTCGG
CGCCTGGCGA CCACCCCCAC CGCCTACCGC CAGGCATTTC GGAGTGAGCA CCCTGCGTGA
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| Protein sequence | MRTIAVLAFD TVVGFELAMP GQIFGSARSA DGEALYRVRI CAPSPDIQVN AAGGPSHRML
APFGLDGLDG AGTVIVPAHE TDDIPPVILD ALRRKHSDGA RVASICTGAE VLAAAGLLDD
RPAATHWRHA DRIARRFPRV RFDASVLYVD DGRVLTGAGV SAGIDLCLHL IRRDHGAAVA
AEVARRIVMA PERGGGQAQF IPWDNDPGDD RQLADTMTWA RARLHAPLTL DELAAHARVS
VRTLIRRFRE QTSQTPLQWL IGQRVQRARE LLETTNLDME DIARRCGFGV ATALRHQFRR
RLATTPTAYR QAFRSEHPA
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