Gene Snas_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1639 
Symbol 
ID8882829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1731543 
End bp1732238 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID 
ProductHaloacid dehalogenase domain-containing protein hydrolase 
Protein accessionYP_003510435 
Protein GI291299157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.175401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCTC GCGCGGTGAT CTTCGACCTC TTCGACACCC TGGTGGACGG CGGCACCACG 
CGACGCCGCG AGATGATCGC GCGCATGGGC GTCGATCTCG GCATCGACCC CGAGGTGTTC
AAGGCCGCGT TTCGGGACAG TTATCGCGAA CGCTTCGCCG GGACGCTGGG CGACATGGAA
CAGACGATCA CGACGCTGAT CCGCCGCTGC GGCGCCGAAC CGGACCCGGA AGCCGTCGCG
GTGGCGGCGC GGCACCGCGT CGACTACACC CGCCGGTTGC TGACGCCGTT CCCGGGTGTC
CTCGAAGTAC TGTCTACGTT GGTGTCCGAC GGGCTGCGGG TCGGGCTGAT CACCAACTGC
TCGGTGGAGA CCCCGCAGGT GTGGTCGGAA ACCCAACTGG CGCAGTACAT CCAGGACCCG
GTGTTCTCGT GCCGGGTCGG GGTGTGCAAA CCGGATCCGG CGATCTACCG GCTGGCCCTC
GACGCCCTGG GTGTGAGCGC TGCGGAGAGT GTCTACGTCG CCGACGGCGC CGGGGGAGAA
CTGGTGGGGG CCCGCGACCT CGGCATGACG ACGATCCGGG TCCGGGCCGA GGGAGTCGAT
CACGCGACCT TCGGCGCGAT CGGCGATTGG GACGGGCCGG TCATTGAGGA CTTGACCGAA
TTGCCGGGTC GATTGCCGGA ACTGATGGCA TCATAG
 
Protein sequence
MAARAVIFDL FDTLVDGGTT RRREMIARMG VDLGIDPEVF KAAFRDSYRE RFAGTLGDME 
QTITTLIRRC GAEPDPEAVA VAARHRVDYT RRLLTPFPGV LEVLSTLVSD GLRVGLITNC
SVETPQVWSE TQLAQYIQDP VFSCRVGVCK PDPAIYRLAL DALGVSAAES VYVADGAGGE
LVGARDLGMT TIRVRAEGVD HATFGAIGDW DGPVIEDLTE LPGRLPELMA S