| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1634 |
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| Symbol | |
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| ID | 8882824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1724417 |
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| End bp | 1727593 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003510430 |
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| Protein GI | 291299152 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.453274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.125292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGATAG AACTGCTCGG TCCGGTCCGG GCGTATACAC AGGACGACAC CCCGGTACCG
CTGGGCGGCC TCCGGCTGCG GATGCTGCTG GCGCGGCTCG CGCTGGTGCC CGGCAGCACC
GTCACCGCCT CGACGCTCAT CGACGAGCTG TGGGGCGCCG ACGCCCCCGC GCAGGCGGGC
AACGCGTTGC AGGCGTTGGT CTCGCGGCTG CGCAAGGCGT TCGGGGACGT CGGCTCGGTG
GCCTCGGTCG CCAGCGGGTA CCGGCTGTCG GCCACCGAGC CGGACGTCGA CACGCACCGG
TTCGAGGAGC TGGCCGTCCG GGGGCGGCGG GAGCTGGCGG ACGGACGGGC CGGACAGGCC
GCCGCCGTGC TGTCGGCCGC GCTGGAGCTG TGGCGCGGCG AGGCACTGGC CGACGTGCGC
GACGCCCCGT TCGCGCGGCC CGTGGTGGTG CGGCTGGACG AGCTGCGGGC CGCCGCCGTG
GAGGATCACG CCGAGGCGAT GCTGCGGCTG GGACGGCACG CCGAGGTGCT GGCCGACCTG
GAGACCGCCA CCACCGAGCA TCCGCTGCGG GAACGCTTGG CGGCCTTGCG CATGCGGGCG
CTGCACGCCG CCGGACGGCA GGCCGAGGCC CTGGCGGTCT ACGAGTCGAT CCGCGGCGAA
CTGGCCGAAC GGCTGGGCGT CGACCCGGAC GAGGTGCTGC GGCAGGCTCA CCTGGCGGTG
TTGCGCGGCG AGACCGACCG GCCCCGGCCG CCCGAGCCGG TGTCGGGTCG GCTTCCGTTG
CGGCTGACCA GTTTCGTCGG CCGCGACGAC GAACTCAAAC GGCTCGCCGA GCAGCTGTCG
ACCTCGCGGC TGGTCACCGT CGTGGGCCCG GGCGGTTGTG GCAAGACCAG ACTCGCCGTC
GAGGCCGTGA GCCGCCACCG GCTCCACGAG ACCGGGCGGG TGTGGTTCGC GCCGCTGGCG
GGGGTCGGCT CGGGCGAGGA CGTCGCCGAC TCGGTACTGG GCAATCTGGA CGCTCGGGGC
GCCGACCCGG CGTCGGCGCT GCGGCCGGGC CGCTCGGCCG ACCCGCTCGA CCGGATCGTC
GACCTGCTGG CCGGTGACGA GGCGCTGCTG GTCCTCGACA ACTGCGAGCA CCTGGTGGCC
GCGTGTGCCG TGTTCGCGCA TCGGCTGCTG GACCGGTTGC CACGCTTGAC GATCCTGGCC
ACCAGCCGGG AACCGCTCGG CATCACCGGG GAAGCACTGT GCCCGCTTGG TCCACTGGAG
ACGCCGGACG ACGCGACCGG TCTCGACGCC GCCGACACCG CCGCGGTACG GCTGTTCACC
GACCGGGCCG CCGCGGTGCG CCCCGGCTTC GCCGCCACGG CGTCCAATCT GGAGCTGATC
GTCGAGATCT GCCGTCGCCT CGACGGCCTG CCGCTGGCGG TGGAACTGGC CGCCGCCCGG
CTGCGCGCCC TGAGCCTGGA ACAGATCGCC AAGCGCCTCG ACGACCGGTT CCGGCTGCTG
ACCTCCGGCA GCCGCACCGC GCTGCCCCGG CAACGCACCC TGCAGGCCGT CATCGAGTGG
AGCTGGGATC TGCTGTCCGA CGCCGAGCAG ACCCTGGCCC GGCGGCTGTC GCTGTTCGCG
GGCGGCGCCG GTCTGGCCGG GCTGGAGGCG GTGTGCGGCA ACGACCAGGC CGGGGATCCG
GTCTACGTCG TCGGTTCCCT GATCGAGAAA TCCATAGTGG AAGCGATCGG CGGGGACGAG
CCCCGCTACC GGATGCTGGA GAGCGTGCGC AGCTTCGCCG CCGAGCGGCT GGACGCGGCC
GGGGAACGCG CCGCCGTCGC CGAACGCTTC CGGCGCTACT TCCTCACGCT GGCCGAGGAG
ACCGGCCCCC GGCTGCACGG CCGCGAGCAG CTCGCGGCGG TGGCCGTCTT CGACACCGAG
TACGACAACC TGGTGGCGGC GCTGCGGTCG GCCATCGACG CGTCCGACGC CGACACGGCG
CAGCGGTTGC TGTCGGCGGT GATCTACCAC TGGACCGTCT TCGGCAAGGT GGCGCGACTG
TACGACTTCA CCGACCAGGT GCTCGGCTTC GGCGACGAAC TGCCCGCCGA CGCCCGGGCG
GCGTTCAGCC TGCTGCGGCT ACTCAACGAG GACGCCGAGA CCACTGTGGA AACCATCCGG
GCGGTCGAGG GCGACCGGAT GCGGCAGACC CTCGACGAAT GCGTCCGCAC CGACGCGTTG
CGCCGCTATC CGCTGCTGAT GCTGATCGCG CTGCCGGTGG CGTCGTTTCG TGGCTACGAC
GACCTGTGGG AGAGCGAACT GGCCCGGGGG GCTCGGCATC CCGACACGTG GGTGCGGGCC
GGGGCGGCCT GGGTGGAGAC GTTCATCCGC GCCGACCGCG GCGACTGGGC CGCGGCGTCG
CGCGCCAGAG ACGTCGCGCT GCGAGGTTTC TCCGACGTGG GCGACTGGCT CGGTCAGTCC
ATGTTGCTGG TCAGCACCGC CCAGGCCGCC GCCATCGAGG GCAGGCACGC CGAGGCCCTC
GACCTGTACG AGCGCGCCAT CGCGGTCGAC GTCGAGCTCG CCTGGGACAC CGAGATCTAC
CACCGGACCA TGCTGGCCGC CGAGCTGCTG CGCGGCGGCG ACGCCGAGGC CGCAGGACTC
GAACTCGACG AGGCACTGCG CCGCGCCCGA CTGGGCGGCC ACCGGCAGGC CGAGATCCCG
ATCCTGGTGG GCTACGCGGA CCTGCACCGG CACAACCGCG ACTTCGGACG GGCCGACAAC
ACGATGGCGG AACTGGCCGC GCTGACGAAG CGGCTGTCCC TTCCGGACGA GTCGGCCGAG
GCCCTCGGCG CGTTGCCCCG GATGTCGATC CGGCTCAGCG CGGGTGACAC CCGCGGGGCC
CGGCGGCTGT TCCCCGGGGC CCTGGCGGCG GCCACCGGGA TGCTCGAACT CCCGTCGGCC
GCCGAGTTGC TGGCCCGGCT GCTGGCCGCC GAGGACGCAC CGCTGGCGGC GGCCCGGGCG
CTGGGCTGGA GCCAGGCGAT CCGGGGCGCG TTCGACCGGG GCAACCCCGA GCTGGCGAGC
CTGACCGATC GGCTGCGGGA TCGTCTGGGC GACAACGCGT TCCAGAGCGC CTTCGACGAG
GCCTCGGCCA CGCCCCGCGC CGAGGCCTTC ACGAGGCTGA CCGAGGCGGC GGGCTGA
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| Protein sequence | MRIELLGPVR AYTQDDTPVP LGGLRLRMLL ARLALVPGST VTASTLIDEL WGADAPAQAG
NALQALVSRL RKAFGDVGSV ASVASGYRLS ATEPDVDTHR FEELAVRGRR ELADGRAGQA
AAVLSAALEL WRGEALADVR DAPFARPVVV RLDELRAAAV EDHAEAMLRL GRHAEVLADL
ETATTEHPLR ERLAALRMRA LHAAGRQAEA LAVYESIRGE LAERLGVDPD EVLRQAHLAV
LRGETDRPRP PEPVSGRLPL RLTSFVGRDD ELKRLAEQLS TSRLVTVVGP GGCGKTRLAV
EAVSRHRLHE TGRVWFAPLA GVGSGEDVAD SVLGNLDARG ADPASALRPG RSADPLDRIV
DLLAGDEALL VLDNCEHLVA ACAVFAHRLL DRLPRLTILA TSREPLGITG EALCPLGPLE
TPDDATGLDA ADTAAVRLFT DRAAAVRPGF AATASNLELI VEICRRLDGL PLAVELAAAR
LRALSLEQIA KRLDDRFRLL TSGSRTALPR QRTLQAVIEW SWDLLSDAEQ TLARRLSLFA
GGAGLAGLEA VCGNDQAGDP VYVVGSLIEK SIVEAIGGDE PRYRMLESVR SFAAERLDAA
GERAAVAERF RRYFLTLAEE TGPRLHGREQ LAAVAVFDTE YDNLVAALRS AIDASDADTA
QRLLSAVIYH WTVFGKVARL YDFTDQVLGF GDELPADARA AFSLLRLLNE DAETTVETIR
AVEGDRMRQT LDECVRTDAL RRYPLLMLIA LPVASFRGYD DLWESELARG ARHPDTWVRA
GAAWVETFIR ADRGDWAAAS RARDVALRGF SDVGDWLGQS MLLVSTAQAA AIEGRHAEAL
DLYERAIAVD VELAWDTEIY HRTMLAAELL RGGDAEAAGL ELDEALRRAR LGGHRQAEIP
ILVGYADLHR HNRDFGRADN TMAELAALTK RLSLPDESAE ALGALPRMSI RLSAGDTRGA
RRLFPGALAA ATGMLELPSA AELLARLLAA EDAPLAAARA LGWSQAIRGA FDRGNPELAS
LTDRLRDRLG DNAFQSAFDE ASATPRAEAF TRLTEAAG
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