Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1621 |
Symbol | |
ID | 8882811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1712598 |
End bp | 1713686 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | HpcH/HpaI aldolase |
Protein accession | YP_003510417 |
Protein GI | 291299139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0115166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000158082 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGACACGC CGATCGTGAC CGCGCTGTAC GCACCGGCCA GCAGACCGGA ACTGTTGCCC AAGGCCATGG CGAGCGGGGC CGACGCGGTG ATCGTGGACC TGGAGGACGC GGTGCTGGCC GGGCGCAAGG AGGAGGCGCG CGCGAACGTG CTGGCGTTCC TGGACGGCTT GGCCGAGGCC GACGCGGGTC CGAGCGGCTC GGCTGAGCTT GGCGAACGGG GCACGTCGGC TGACGGCAGC CCAAGCGGCT CGGCCGAGCC GAGCGAGCGG AGCTCGTCGG CGGGGGAGCG GGGCGAGGGC CCGGCGGAGT CCGCTGTGGA GCGGGTGCCG ACGATTCCGG TGCAGCGCGG GCGATCGGGC GGTTCGCGCG AGCGTGGAGC CGAGGCCGGG GCGCGGCGGT CGGGGCCGCA CTGTCGGCCG GTGGTTCAGG TCCGGGTCAA CCATCCGCGC GGTGAGTTCG GCCCGCGTGA CCTGGCCGCG TTGGGGGCGC ATCCCGTGGT GCGGGCCGGG CGGGTCGCGG TGCGGTTGCC GAAGGTCGCC GGGCCGCAGG ACGTCGATCT GGCGCTCGAC ATGCTTAATG TGGACGCGCC GCTGGCGGTC CACTGCCTGC TAGAGTCCGC GATCGGTGTT GAGTACGCGC GTGACATCGC CGCCCACCCG GCCGTGGCCG GGCTCGCGCT CGGGGAGGCC GACCTGGCCG CCGAGCTGGG TCTGCGCGGC GAGGAGTCCT TCGGCTGGAT CCGCAGCCGC ATCGTCATCG CCGCCGTCGC CGCGGGCCTA CCGGCCCCCG CGATGGCGGT CTACACCGAT CTGGCCGACC CACGGGGTCT GGCCGAGTCG TGTGCGCGGG GCCGGGCGCT CGGCATGTTC GGTCGCACCG CCCTGCACCC CAAACAGCTG TCGACGATCA CCGCCGCGTT CGCCCCCGAC GGGGTCGAAC TGCGTCGCGC CCACGAGGTG GTGACCGCGG CAGCTGGTGC CGAGGCCGAC GGGAGCGGCG CGATCGCCCT GCCCGACGGA CGGTTCATCG ACGCACCCAT GGTCGAGTCC GCCAAACGCA CCATCCAGCT CGCGGAACGG CTCGGTTGA
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Protein sequence | MDTPIVTALY APASRPELLP KAMASGADAV IVDLEDAVLA GRKEEARANV LAFLDGLAEA DAGPSGSAEL GERGTSADGS PSGSAEPSER SSSAGERGEG PAESAVERVP TIPVQRGRSG GSRERGAEAG ARRSGPHCRP VVQVRVNHPR GEFGPRDLAA LGAHPVVRAG RVAVRLPKVA GPQDVDLALD MLNVDAPLAV HCLLESAIGV EYARDIAAHP AVAGLALGEA DLAAELGLRG EESFGWIRSR IVIAAVAAGL PAPAMAVYTD LADPRGLAES CARGRALGMF GRTALHPKQL STITAAFAPD GVELRRAHEV VTAAAGAEAD GSGAIALPDG RFIDAPMVES AKRTIQLAER LG
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