| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1614 |
|---|
| Symbol | |
|---|
| ID | 8882803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1703029 |
|---|
| End bp | 1704000 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_003510410 |
|---|
| Protein GI | 291299132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0215766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA TCTCCGCCGA TCCCGGCCTC TCCGGACGGC TGGTCTCGGG CGAGGCGGTC
GAACTCGACG TCCGAGTAGC CCGACTCGGC TCCCGAGTAC TCGCGTTCGG CATCGACTTC
ACCATCAGCG TCATCGCCGC GGCCATCTTC TACGTGGTGT CCATGCTGCT GCTCTACACC
CTCGCCGCCT CCACCTCCCT GGTCGACGAG GCCCTGCTGG TCGCCATCAT CACCATCGAC
ATGGTGCTGG CCTTCGTCGG CGTCCCCGCC ACCATCGAAA CGCTCTCCAA AGGACGATCC
CTGGGCAAAC TCGCGGTCGG CCTCCGAGTG GTCCGCGACG ACGGCGGCCC CATCCGCTTC
CGCCACGCCC TCATCCGCGC CCTCTCCGCC TTCGCGGTCG AGTTCCCCGG CCTCCTCCTC
CCCGGCATCT CCTGGTTCGC GGCCCTGGGC GTCATGCTCA TCCACCCGTC CGGCAAACGC
TTCGGCGACC TCTCGGCGGG CACCATCGTC ATCCACGAAC GCACCCCCCA CGCCCGCATC
TGGGTCCCCA TCATGCCCCC GGGCCTCGCC GGCTGGGCCG CCGTCACCGA CCTGACCGCC
CTGGACGACA ACCTCGCCCT CTCCATCCGC CACTTCCTGG CCCGCAACCA CGAAATAGCC
GAACCGGCCC GCACCAAACT CGGCCTCGCC CTAGCGGCCG AACTCAACTC CTTCGTGGTC
CCCCCACCCC CACCGGGAAC CCCGGGCTGG GCCTTCCTGG CCGCGGTCCT CTCCGAACGC
TACCGCCGAG CCTCCTCCCG CCTAGCGGCC AGCCGCGCGG TCACCGCCCA AGTCTGGGAC
ACCCTCTACG GCCCCCACCA AGGCCAAGCA ATGTGGACAC ACGCCCCACC CCCGGTCTGG
ACCGCCCCAC CCACCACACT TCCGCAGGTC CCAGCCGCGC CAGCCCACCC CGCCACCCCC
GGAGCCTGGT AA
|
|---|
| Protein sequence | MSDISADPGL SGRLVSGEAV ELDVRVARLG SRVLAFGIDF TISVIAAAIF YVVSMLLLYT
LAASTSLVDE ALLVAIITID MVLAFVGVPA TIETLSKGRS LGKLAVGLRV VRDDGGPIRF
RHALIRALSA FAVEFPGLLL PGISWFAALG VMLIHPSGKR FGDLSAGTIV IHERTPHARI
WVPIMPPGLA GWAAVTDLTA LDDNLALSIR HFLARNHEIA EPARTKLGLA LAAELNSFVV
PPPPPGTPGW AFLAAVLSER YRRASSRLAA SRAVTAQVWD TLYGPHQGQA MWTHAPPPVW
TAPPTTLPQV PAAPAHPATP GAW
|
|---|
| |