Gene Snas_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1609 
Symbol 
ID8882798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1696671 
End bp1698725 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510405 
Protein GI291299127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.173558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG GCGGTGGCGC AGACTTCTTC AGCAGCCTGG GCGAGTCCGG CAGCACGGAT 
CGTGGGTTCG AGCAGTCCCT GCGTGGATAT GACAAGAAAC AGGTCGACAA GTATCTGTCG
AGTATGGATA CGGAGCTGGC CTCGCTCGCC GCGGAGAAGG CCGAGGCGAT GGCCCAGGTC
GACCGGCTCG TCATGCAGGT GCAGCAGCTT CAGGCCCAGA TCCAGGACAT CCGCCGTCGC
GCCGCCGTCG GTGAGAAGGT CTCCTTCAAA CACCTCGGGG CCCGGGTCGA GCACATCCTG
ACGCTGGCCG AGGAGGAGGC CGAGGCGATC AAGCAGCGGT CGGTGGACGA GTTCGCCGCC
GAGCGCGCCG CGATCGAGAA GCTGCGTCGC GACGTCGAGG CCGAGACCGA GAAGGCCCGC
CACGACTTCG AGACCGCGCT GGCCGCGCGC CGGGCCGCCG CCGAGAAGGC CGAGGCCGAC
CGGCGCCACA TCGTCGACGC CGAGATGAAC AAGCGGGCCC AGCAGGCCCA GAACATGGTC
AACGAGGCCA CCGAGAAGGC GGCCCAGATC CAGGCCGAGG CCGAGCAGGC CGCCGAGCGG
ATCCGCAAGG CCGCCGACGA GCAGGCCAAC AAACTGGCCG CCCAGGTGGA CCGGCTGCGC
ACCGAGGCCC AGGCCAAGAA GCAGGAATCC GAAGTGGAGG CCGAGCAGGT GCGGCAGGCC
GCCGCCCAGC AGGCCTCCGA CACCCTGAGC AAGGCCAACG CCGAGGCCGA GCGGCTGCGC
TCCGACGCCG TCGCCGAGGC CGACAAGATC CGCACCGACG CCCAGACCGC GGCGGACAAG
TTCAAGAAGG AGGTCGAGGC CGTCGCGCTG ACCGTGCGCT CCGAGGCCGA GACCGAGGCG
ACCCGGCTGC GGTCGGAGGC TGAGAGCCAG ACCGAGCAGC TGCGGGCCGA GGCCACCGGC
AAGCACGAGC AGGCCGCCAA GGAGCTGGAG GACGCCAAGA CCGTCTCCGC CAAGGCGCGG
GCAGAGGCGG AGAAGTTGTC GGCCGAGATC CTCGCCAAGG CCGAGGCTGA GGCCAGTGAG
CTCACCGCGA CCGCCAAGGC CCAGGCAGAG AAGGTCACCC GCGAGGCCCG CGAGGCCGCG
GAGAAGCTCA CCGCCGAGTC GACGCAGCGC GCTGAGAAGC TGCGCTCCGA CTCCACCGCG
GAAGCCGAGC GGGTTCTCAG TGAGGCCAAG GCCGCGGCCG AGAAGCTCAC GACGGACTCG
ACGCAGCGCG CTGAGAAGCT GCGCTCCGAC TCCACCGCGG AAGCCGAGCG GGTTCTCAGT
GAGGCCAAGG CCGCCGCGGA GAAGCTCACC ACCGAGTCGA CACAGCGGGC CGAGAAGCTG
CGCTCCGACT CCACCGCGGA AGCCGAGCGG GTCCTCAGTG AGGCCAAGGC GGAGGCCGAG
CAGCTGACGT CCAAGGCCAA GACCGACGCC GAGCAGCTGA CCTCGCAGGC CGAGGCCGCC
GCCAGCAAGC TGGCCGCCGA CGCCGAGGAG TACGCCAACG GCGTCACCGC CGAGGCCGAC
AAGCGCATCG CCGAGCTGAC CGCCGACGCC AAGCAGCGCA GCCAGGCCGC GATCGCCGAG
GCCGAGGACA AGGCCGCGAA GTTGGTGGCG GACGCGGAGA AGAAGGCCGA GGGCATCCGC
AAGCGCGCCG ACGACGGCGC CCGGTCGGCG GCGCAGACCG CCAGGCGCGA CGCTGAGGCC
ATCCTGGGCA CCGCCCGGGC TCAGGCCAAG AAGCTCGTCG CCGACGCCAA GCAGAACAAG
GCTCCGGCGG CTCCCAGCGA CCAGACCATC GAGATCAGCA AAGCCGAGGT GGACGCGGCG
CTGGCCGACA AGGCGTCGAA GGACGAATCC TCCGCTAAGG ACGATTCCGG CGACGACAAC
GGCGGCAAGA AGGGCGCCAA GAACACCAAG GGCAACCGGG GTGGCAACGC CAAGTCCAAG
AACTCGTCCT CCACAGGTGA GTCCGGGCAA GCATCCGAGA GTGAGACCGT GCACACTGGT
ACCCGCACGG CTTGA
 
Protein sequence
MSHGGGADFF SSLGESGSTD RGFEQSLRGY DKKQVDKYLS SMDTELASLA AEKAEAMAQV 
DRLVMQVQQL QAQIQDIRRR AAVGEKVSFK HLGARVEHIL TLAEEEAEAI KQRSVDEFAA
ERAAIEKLRR DVEAETEKAR HDFETALAAR RAAAEKAEAD RRHIVDAEMN KRAQQAQNMV
NEATEKAAQI QAEAEQAAER IRKAADEQAN KLAAQVDRLR TEAQAKKQES EVEAEQVRQA
AAQQASDTLS KANAEAERLR SDAVAEADKI RTDAQTAADK FKKEVEAVAL TVRSEAETEA
TRLRSEAESQ TEQLRAEATG KHEQAAKELE DAKTVSAKAR AEAEKLSAEI LAKAEAEASE
LTATAKAQAE KVTREAREAA EKLTAESTQR AEKLRSDSTA EAERVLSEAK AAAEKLTTDS
TQRAEKLRSD STAEAERVLS EAKAAAEKLT TESTQRAEKL RSDSTAEAER VLSEAKAEAE
QLTSKAKTDA EQLTSQAEAA ASKLAADAEE YANGVTAEAD KRIAELTADA KQRSQAAIAE
AEDKAAKLVA DAEKKAEGIR KRADDGARSA AQTARRDAEA ILGTARAQAK KLVADAKQNK
APAAPSDQTI EISKAEVDAA LADKASKDES SAKDDSGDDN GGKKGAKNTK GNRGGNAKSK
NSSSTGESGQ ASESETVHTG TRTA