Gene Snas_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1594 
Symbol 
ID8882783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1672551 
End bp1675313 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510390 
Protein GI291299112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGC GGAAACTGAT TGAGGTCGCA CTACCCCTAG AAGCAATAAA CCGTGAGTCG 
GCACGGGAGA AGTCGATTCG GCATGGACAT CCGTCGACGT TGCATCTCTG GTGGGCTCGT
CGCCCACTTG CGGCGGCTCG GGCAGTGCTG TTCGCGCAGC TTGTCGATGA TCCATCCTCT
CGGCCCGAGG AATTCCCAAC TGAGGAGCTG CAACGTAAAG AGCGCGAGCG GCTGCACAAA
CTTATCGAGC GGCTTGTCGT ATGGGAAAAT GCTCGGGACG AGAAACTGTT CGCTGAGGCA
TATGCTGAGA TCCTAAATTC CACAAACGAC TACCCGCCAC CGATTCTAGA TCCATTCGCT
GGCGGTGGTT CTATACCGCT TGAAGCAAAA CGTCTTGGCC TGGAAGCATA TGCCTCTGAT
CTCAATCCGG TTGCAGTTCT TATCAACAAA GCCCTAATTG AGCTCCCGCC AAAATTCCAT
GGCCAGCTGC CTGTCTTTCC TGGGCTGGCA GACTCTGAGT TTCGGGTTTG GAAGGGGACA
CAGGGACTTG CTGCAGATGT TCGTGCCTAT GGTGCCTGGA TGGGCGAGGA GGCTGAGGAT
CGGATTGGCC ACCTCTACCC AAAGGCCCAT CTTCCCGATG GTTCAAAAGC TACAGTCATC
GCTTGGATCT GGGCCCGTAG TGTAACCTGC CCCAACCCTG CCTGTCGCAT TGAGATGCCA
CTGGTCCGGT CATGGTGGTT GGGCAAGAAG AAAGGGAAGG AAGCGTACGT GGTTCCTTCC
GTGGTCGCCG ACCCTAGTCA TACTTCGGGA TATCGGGTGA AGTTCGAGAT TGGTCACGAT
ACGGCCGGTA TGCCAACCAA GGAAAGCGAC GGCACAATGT CAGGGCGTAA GGGCGGCAGT
TGCATTGCCT GTGGCTCGCT AGTGAGCAAG GATCACATCA AATCTGAAGG CATGGCTGGA
CGAATGGGCG CGACACTTAT GGCTGTTGTT ACAGAAGGCA AACGTCAACG GATCTACATT
TCTCCGACAG AAGAGCATGT CACAGCTGCG CAAGTCGAGC GACCGAACGA TGTGCCAGAA
CAGGAACTTG GCTACGACCC ACGCAATATC TGGACACCAC AGTATGGCTT GACGAAATTT
TCAGATCTTT TCACTAATCG TCAACTTGTC GCGCTTACGA CTTTCAGCGA CCTCATCTCT
GAGGCTCGTG ATCGTGTCCT CGCTGATGGA GGCAAGACTG AGTATGCCGA CGCCGTTTCG
ACCTACCTTG GACTTGTAGT CAGCAAGATG ACAGATCGGA ATTCTACTCT TGTCAATTGG
TATGTTTCGC GTGAGTCAAC CAGCTCAACA TTCGCTCGCC AAGCACTTCC TATGGTATGG
GATTTCGCAG AGGTCGAGCC GCTTGGCGCG AACACGGGTT CTTTCAGTAA TTCGCTTCTT
TGGACGGCTG AGGCAATTGA AGGACTTTGT AGTAAAGGAG GAACATCGAT AAGTCAGAGC
GATGCTGCTT CGCGTCGTTA TAATGGAGTA CCACTTAGTA CAGACCCACC ATACTACGAC
AATATCAGTT ATTCAGATCT TTCCGACTAC TTCTATGTGT GGCTTCGGCG ATCACTATGG
TCAATTTATC CCGATCTGTT TGCAACGGTG CTTGTGCCGA AAGAGCAGGA ACTTGTCGCT
AACCCGTATC GCCATGGAGG CAAGGCGAAG GCAAGGAAAT TCTTTGAAGA CGGTTTTCGA
AAGGTCTTTA CTCTTGCTCG TAACGCTGAC CGTATGGGCT TGCCCATAAC TGTTTACTAT
GCATTCAAGC AGAACAGCAT TGATGAAACG GGCAAAGCTT CAACGGGTTG GGAAACCTTC
CTGGAAAGCA TGATCCATGC TGGCTGGGAG ATAACGTCTA CATGGCCGTT GCGCAGCGAG
CTTTCGAACC GAATGTTGGC AAGCGGAACG AATTCGCTCG CCTCCTCAAT AGTACTGTCC
CTTCGACCGT GTCCTAAGAA TGCTTCTACG ACGGATCGAC GAGGGTTTAT TAGAGCTCTG
GAAGCCGAAC TTCCCGAAGC GCTACGCAAA ATGCAGCATG GTCAGATTTC CCCTGTCGAC
TTGCCGCAAG CCGCGATCGG TCCCGGAATG GCGGTGTTCA GTCGTTACGC TGCGGTAATC
GAGAACGATG GTTCAAAGAT GTCCGTCAGA TCAGCACTGG CTCGGATCAA TGAGGTTCTC
GACCAAGTAC TGTCCGAACA AGAGGGTGAC TTCGACGAGA CCACTCGCTT CGCCGTCACG
TGGTACCGCC AGCACGGATA TGGGGCGGGA GAGTTCGGCA ACGCGGACAG TCTCGCCCGG
GCTCGAAACA CCAGTGTCGA CACGATGAGT GGTGCCGGGA TTCTTACGAG CCGAGCAAGC
AAGGTTCAAC TCATCAGACC GTTGGACCTG CCGAAGAAGT ACCACGTACT CCAAGACGGT
GTCACCAGCA ATTGGGAAGC GCTGCATCAC CTAGTCAAAA TCGTGGAACG CAATGGGATC
CCGCGAGCTG GCGAATTTCT TCACACCGCG TTGAGCCGCT CGGAGGAAGA GATCAACGCA
GACATCATCA AAGAACTTGG CCACCTGTTG TTCCGTATCT CCGAAAACCA CGGTTGGGCC
CATGACGCGC TTAGCTTCAA CAACCTAGTT ACAAGCTGGC CCGAGATCCT CGAGGCGGCG
CGATCCGCAG AAGAGCCTGG ATACATGCAG CCCTCACTGA ACCTTCCCGA CGAGGACAAC
TGA
 
Protein sequence
MRKRKLIEVA LPLEAINRES AREKSIRHGH PSTLHLWWAR RPLAAARAVL FAQLVDDPSS 
RPEEFPTEEL QRKERERLHK LIERLVVWEN ARDEKLFAEA YAEILNSTND YPPPILDPFA
GGGSIPLEAK RLGLEAYASD LNPVAVLINK ALIELPPKFH GQLPVFPGLA DSEFRVWKGT
QGLAADVRAY GAWMGEEAED RIGHLYPKAH LPDGSKATVI AWIWARSVTC PNPACRIEMP
LVRSWWLGKK KGKEAYVVPS VVADPSHTSG YRVKFEIGHD TAGMPTKESD GTMSGRKGGS
CIACGSLVSK DHIKSEGMAG RMGATLMAVV TEGKRQRIYI SPTEEHVTAA QVERPNDVPE
QELGYDPRNI WTPQYGLTKF SDLFTNRQLV ALTTFSDLIS EARDRVLADG GKTEYADAVS
TYLGLVVSKM TDRNSTLVNW YVSRESTSST FARQALPMVW DFAEVEPLGA NTGSFSNSLL
WTAEAIEGLC SKGGTSISQS DAASRRYNGV PLSTDPPYYD NISYSDLSDY FYVWLRRSLW
SIYPDLFATV LVPKEQELVA NPYRHGGKAK ARKFFEDGFR KVFTLARNAD RMGLPITVYY
AFKQNSIDET GKASTGWETF LESMIHAGWE ITSTWPLRSE LSNRMLASGT NSLASSIVLS
LRPCPKNAST TDRRGFIRAL EAELPEALRK MQHGQISPVD LPQAAIGPGM AVFSRYAAVI
ENDGSKMSVR SALARINEVL DQVLSEQEGD FDETTRFAVT WYRQHGYGAG EFGNADSLAR
ARNTSVDTMS GAGILTSRAS KVQLIRPLDL PKKYHVLQDG VTSNWEALHH LVKIVERNGI
PRAGEFLHTA LSRSEEEINA DIIKELGHLL FRISENHGWA HDALSFNNLV TSWPEILEAA
RSAEEPGYMQ PSLNLPDEDN