Gene Snas_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1593 
Symbol 
ID8882782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1671570 
End bp1672274 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510389 
Protein GI291299111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.284759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGGC TGGGTTTGGC GCTGGCTACG CTGTCGCGCA TGCGTCTCGT CATCGCGCGC 
TGTTCGGTGG ACTACACCGG ACGGCTGTCC GCACACCTGC CCATGGCTCC CCGGCTGCTG
ATGCTCAAGG CGGACGGCAG CATCCTCGTA CACGCCGACG GGGGTTCGTA CAAGCCCCTG
AACTGGATGA CACCGCCGTG CTCGCTCAAA GAGGAGGATG GCTTGTGGAC GGTGACGAAC
AACAAGTCCG GTGACACGCT GCGGATCACG ATCGAGGAGA TCCTGCACGA CACGACCCAC
GAGCTGGGTG TGGACCCGGG CTTGCAGAAG GACGGGGTGG AGGCGCACCT GCAGGAGCTG
CTGGCCGCCG ACCCGACGCC GATCGGCGAG GGGTATTCGC TGGTGCGGCG GGAGTTCCCG
ACCGCGATCG GGCCGGTCGA TCTGATGTGC CGGGATTCCG AGGGCGTCAG TGTGGCCGTG
GAGATCAAGC GGCGCGGCGA GATCGACGGT GTGGAGCAGT TGACCAGGTA TCTGGAGCTG
CTGAACCGGG ATCCGTTGTT GGCTCCCGTG CAGGGGGTGT TCTGCGCTCA GGTGATCAAG
CCGCAGGCGC GGGTGCTGGC CGAGGATCGC GGCATCCGGT GCGTGACGGT GGACTACGAC
ACCCTGCGCG GCACCGTGGA CGACTCGCAG CCGACGCTGT TCTAG
 
Protein sequence
MLGLGLALAT LSRMRLVIAR CSVDYTGRLS AHLPMAPRLL MLKADGSILV HADGGSYKPL 
NWMTPPCSLK EEDGLWTVTN NKSGDTLRIT IEEILHDTTH ELGVDPGLQK DGVEAHLQEL
LAADPTPIGE GYSLVRREFP TAIGPVDLMC RDSEGVSVAV EIKRRGEIDG VEQLTRYLEL
LNRDPLLAPV QGVFCAQVIK PQARVLAEDR GIRCVTVDYD TLRGTVDDSQ PTLF