Gene Snas_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1564 
Symbol 
ID8882753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1642428 
End bp1642898 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003510360 
Protein GI291299082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.413479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC GACTCGCGCC CGGCGACACC GCGCCCGCCT TCGACCTGCC CACTCACGAC 
GGCGGCCGCC TCAGCCTCGA CTCACTGAAG GGCCACAAGG TCATCCTGTA CGCCTACCCC
GCGGCCATGA CGCCCGGCTG CACCAAGCAG GCCTGCGACT TCCGCGACAG TCTCGCCTCG
CTTCAGGCCG CCGGGTACCG GGTGGTCGGC ATCTCCCCCG ACAAGCCCGC CAAACTGGCC
AAGTTCGTCG AGCGCGACGC GCTGACCTTC CCGTTGGTGT CCGATGGGGA CAAAGAGGTG
CTCAACGCCT ACGGCGCCTA CGGCGAGAAG AAGAACTACG GCCGCGTCTA CGAGGGCGTC
ATCCGCTCCA CCTTCGTGAT CGACGCCGAC GGCAAGATCG AAGTGGCCCA GTACAACGTC
CGCGCCACCG GCCACGTCGC CAAACTGCGG CGCGACCTGG GGCTGGACTG A
 
Protein sequence
MTTRLAPGDT APAFDLPTHD GGRLSLDSLK GHKVILYAYP AAMTPGCTKQ ACDFRDSLAS 
LQAAGYRVVG ISPDKPAKLA KFVERDALTF PLVSDGDKEV LNAYGAYGEK KNYGRVYEGV
IRSTFVIDAD GKIEVAQYNV RATGHVAKLR RDLGLD