Gene Snas_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1562 
Symbol 
ID8882751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1641365 
End bp1641787 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510358 
Protein GI291299080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.976528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTCG TTCGCGGCTT CACCTTTCCC GACGGCGTCC ACTGCTTCGA CGCCACCCTC 
GTCTTCGATC AGGCCCGCCA GATCATCGTC GACTACCTGG GCACCCACCA GCATCTGGCC
GCCGAGCTGC ACCTGAGGGT GGACGACGAG GGCGCGCTGT CGATCCGCTC GGGACGGCAA
CTGTTCCTGG AGGGACCGGT CGACATCCGG CTGCCCGGGA TCCTGACCGG CACCGCCCGG
GTACGGGAGT CCTTCGACGA CCGCACCGGA CGGTTCGGCA TCGAGGTCCG GGTGGCCAAC
CCCGTGCTGG GCCCGCTGTT CGCATACCGG GGCTCCTTCA CCACCGAATA CGTCCGTCTC
GACGAGCACC CGGTTCCGGC TAGGGTGAAA CCGCGTCGCG AGGAGTCGCG CGGCACCGGG
TGA
 
Protein sequence
MTFVRGFTFP DGVHCFDATL VFDQARQIIV DYLGTHQHLA AELHLRVDDE GALSIRSGRQ 
LFLEGPVDIR LPGILTGTAR VRESFDDRTG RFGIEVRVAN PVLGPLFAYR GSFTTEYVRL
DEHPVPARVK PRREESRGTG