Gene Snas_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1549 
Symbol 
ID8882738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1629889 
End bp1630554 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003510345 
Protein GI291299067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.945663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAGG CCCAGGTTGC GCGGCAGCCA TTGGCGGATC AGATGTACGA GGTTCTCCTC 
GACCGCTTCA TGAACGGCGT CCACGCCGCC GGTGAACCCC TCAACATCGG TGCCTTGTCT
CGCGAGCTCA ACGTCAGTCA GACCCCGCTT CGCGAGGCCC TGGCCCGGTT GGAGCACACC
GGTTTGGTCC GTCGGGAGGC GATGAAGGGT TATCGGGTCT CGCCGTCGAT GACCAAGAGC
GAGATCGGCA AGCTGATGGA CGCGCGGGTG GTGTTGGAGT CGGCGATGAC GTACGAGACG
GCTCTGCGTA CGACGCCGGA GTTTCTGGAT GAGTTGCGGC AGACGGTTGA GGATCTGGCG
CAGTCGGCTG AGCGCGCCGA TACCGAGACG GAGTACTTCC GGCGGTATTG GAGTTCGGAT
GATCGGTTTC ACGCTTTGAT CGCTGAGCGT TGCGATAACC CGTTTTTGGA GGCGGCTTAT
CGGGCGTTGG GTGGGCAGAT TCAGCGGTTT CGGTTGTTCT CGAAGTTGGG TCACACGGGG
GCGCAGTTCG CGGCGCGGGA GCATCGGGCC GTGTATGAGG CCCTGGCGGA TCGGGATCCG
GAGCGGGCGG CGGAGCTGAT GCGTGAGCAC ATCGAGAGTG CGAAGAACCG GAATTTGAGT
CACTGA
 
Protein sequence
MAEAQVARQP LADQMYEVLL DRFMNGVHAA GEPLNIGALS RELNVSQTPL REALARLEHT 
GLVRREAMKG YRVSPSMTKS EIGKLMDARV VLESAMTYET ALRTTPEFLD ELRQTVEDLA
QSAERADTET EYFRRYWSSD DRFHALIAER CDNPFLEAAY RALGGQIQRF RLFSKLGHTG
AQFAAREHRA VYEALADRDP ERAAELMREH IESAKNRNLS H