Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1549 |
Symbol | |
ID | 8882738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1629889 |
End bp | 1630554 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003510345 |
Protein GI | 291299067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.945663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGAGG CCCAGGTTGC GCGGCAGCCA TTGGCGGATC AGATGTACGA GGTTCTCCTC GACCGCTTCA TGAACGGCGT CCACGCCGCC GGTGAACCCC TCAACATCGG TGCCTTGTCT CGCGAGCTCA ACGTCAGTCA GACCCCGCTT CGCGAGGCCC TGGCCCGGTT GGAGCACACC GGTTTGGTCC GTCGGGAGGC GATGAAGGGT TATCGGGTCT CGCCGTCGAT GACCAAGAGC GAGATCGGCA AGCTGATGGA CGCGCGGGTG GTGTTGGAGT CGGCGATGAC GTACGAGACG GCTCTGCGTA CGACGCCGGA GTTTCTGGAT GAGTTGCGGC AGACGGTTGA GGATCTGGCG CAGTCGGCTG AGCGCGCCGA TACCGAGACG GAGTACTTCC GGCGGTATTG GAGTTCGGAT GATCGGTTTC ACGCTTTGAT CGCTGAGCGT TGCGATAACC CGTTTTTGGA GGCGGCTTAT CGGGCGTTGG GTGGGCAGAT TCAGCGGTTT CGGTTGTTCT CGAAGTTGGG TCACACGGGG GCGCAGTTCG CGGCGCGGGA GCATCGGGCC GTGTATGAGG CCCTGGCGGA TCGGGATCCG GAGCGGGCGG CGGAGCTGAT GCGTGAGCAC ATCGAGAGTG CGAAGAACCG GAATTTGAGT CACTGA
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Protein sequence | MAEAQVARQP LADQMYEVLL DRFMNGVHAA GEPLNIGALS RELNVSQTPL REALARLEHT GLVRREAMKG YRVSPSMTKS EIGKLMDARV VLESAMTYET ALRTTPEFLD ELRQTVEDLA QSAERADTET EYFRRYWSSD DRFHALIAER CDNPFLEAAY RALGGQIQRF RLFSKLGHTG AQFAAREHRA VYEALADRDP ERAAELMREH IESAKNRNLS H
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