Gene Snas_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1548 
Symbol 
ID8882736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1628791 
End bp1629606 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510344 
Protein GI291299066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.76431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTC ACTTGCGGCG ACGTATCAAC GAGTTTGGAA TAGACATCGG TCATTTCAGG 
CGCGCTGATA ACACCGGCAG GCCGTCGTCT CGCCGCATGA GCCCATCCGA ACTCCTGGTC
CGGCGTCCAG ATGGTGCGAA GCGTCTGGAC GCCGAGCGTC TGCGACGTGC TTTGATCGAG
CTTGGTACGG CATATGAGTG TGTGGCCTGT GGAACTGGTC GTGAGTGGAT GGGACGGCCG
CTTACTTTGC ATGTCGATCA CATCAATGGG GAGTTTCTGG ACTGTCGTCG CGAGAACCTT
CGATTCCTGT GCCCTAACTG TCACAGCCAG ACGGACACGT ATGCGGGTCG CAATCGGCGT
AGATACGGTG GTTCATCGTT GCCCCACGTC AAGCGAACCA AAGACGCCGC TTGGGTGACA
ACAGAAAGCG ACCTCGCTGA GGTTTTCAAG CGAGTCGACT CAGGTGAAAT ATCGGTAGTA
CGCGCTGTCG AGCAGATCGG CTGTTCGCGC GGCCACTATT ACCGGCTTCG AGAGCGAGTG
GCGGAATCCC GATCTGCAGC AATGCGCAAG CAGGTGAGGA ATGCGGCCAG GGAAGTACGT
GACGTGGCGA TTATCGAGTT CGCGCTAGAC CATCCCGAAC TGGGGCCTAA ACCCATAGCG
GCAAGGTTGT CGAAAGCAAC GGATGGAGAG TTGCGAGTCG CGCATGGCAC GGTCGCCAAT
GTGTTGCGAA AGGCGGGACT GCAATACCGC GCCAACCGTG AAAAGGCCGC GAAGTCTCGG
CGTGAAATCG AAGGGTTAGA CTTCGTGACG GCCTAG
 
Protein sequence
MHAHLRRRIN EFGIDIGHFR RADNTGRPSS RRMSPSELLV RRPDGAKRLD AERLRRALIE 
LGTAYECVAC GTGREWMGRP LTLHVDHING EFLDCRRENL RFLCPNCHSQ TDTYAGRNRR
RYGGSSLPHV KRTKDAAWVT TESDLAEVFK RVDSGEISVV RAVEQIGCSR GHYYRLRERV
AESRSAAMRK QVRNAAREVR DVAIIEFALD HPELGPKPIA ARLSKATDGE LRVAHGTVAN
VLRKAGLQYR ANREKAAKSR REIEGLDFVT A