| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1546 |
|---|
| Symbol | |
|---|
| ID | 8882734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1627895 |
|---|
| End bp | 1628620 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_003510342 |
|---|
| Protein GI | 291299064 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.760762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGAC CCGATAATCG CGCGCCCGAC GCGCTTCGTC CCGTCAAGTT CCAGCGCGGC
TGGACCAAGC ATCCGGAGGG GTCGGTGCTG GTCGAGTTCG GTGATACCCG GGTGTTGTGT
ACCGCCTCTG TGGACACCGG GGTGCCACGG TGGCGGCGGG GTTCGGGGTC GGGGTGGGTG
ACTGCTGAGT ACTCGATGTT GCCCCGGGCG ACGAATACTC GGGGGGATCG GGAGGCCGTG
AAGGGCAAGA TCGGGGGGCG GACGCATGAG ATCAGCCGTC TGATCGGGCG GGCGCTGCGG
TCGTGCCTGG ATTTGAAGGC GCTGGGCGAG AACACGATCA CCATCGACTG TGATGTGTTG
CAGGCCGATG GGGGGACGCG GACCGCCGCT ATTACTGGTT CGTATGTGGC GCTTCAGGAC
GCGGTGACGT GGTTGACGGA CAAGAAGATG GCGCGTAAGC CGGACAAGAT CCTGACCCGG
TCGGTGGCCG CGGTGAGCGT GGGGGTTGTC GGGGGGACTC CGGTGTTGGA TCTCAATTAT
GTGGAGGACT CGTCGGCTGA TGTGGACATG AATGTCGTGT GCACTGGGGA TGGGGACTTC
GTGGAGGTTC AGGGCACCGG GGAGGAGGCC GTGTTCGATC GGTCGACCCT GGACGCGCTG
TTGGACCTGG CGACCAAGGG CTGCAAGGAA CTGACGGGCG CGCAGGTGAG GGCGCTGCTG
ACGTGA
|
|---|
| Protein sequence | MSRPDNRAPD ALRPVKFQRG WTKHPEGSVL VEFGDTRVLC TASVDTGVPR WRRGSGSGWV
TAEYSMLPRA TNTRGDREAV KGKIGGRTHE ISRLIGRALR SCLDLKALGE NTITIDCDVL
QADGGTRTAA ITGSYVALQD AVTWLTDKKM ARKPDKILTR SVAAVSVGVV GGTPVLDLNY
VEDSSADVDM NVVCTGDGDF VEVQGTGEEA VFDRSTLDAL LDLATKGCKE LTGAQVRALL
T
|
|---|
| |