Gene Snas_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1530 
Symbol 
ID8882718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1616275 
End bp1616991 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510327 
Protein GI291299049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.577651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCCC GATTCGAAGA ACTCGACTGG CGAGAGACCC CGATGGGGGA GCTGAGTCTG 
CGGCGGCGCG TCGAACCGTC GCTGAAGGTC GACGTGTACG AGGTCAAGCT CGGCGACGAG
TTCCTGATGT CGAGCCTGTT CACCGTCGCC GAGATCGAAC TGGCGCGACT GGGTCTGGCC
GCCGCTACCG GCACCGGCCT CGACGTCGTC GTGGGCGGGC TGGGCCTGGG CTACACCGCC
CGGGCGGCCC TGGCCGACGA GCGGGTGGAC CGGCTGCTGG TGGTCGAGGC GCTGGACGCC
GTCATCGACT GGCACCAGCG CGAGCTGCTG CCGCACGCCG ACGAACTCAC CGGCGACGGC
CGCACCGGCT TCGTCAACGG CGACTTCTTC GCGCTGGCCG CCGATCCGCG CGGTTTCGAC
CCCGCGACCC CCGGCCGCCG GTTCGACGCG GTCCTGCTCG ACGTCGACCA TTCGCCCCGA
CACGTCCTGC ACCCCTCCCA CGCCGCCTTC TACACCCCCG ACGGCCTGCG GGCCCTGGCC
GCGCACCTGC ACCCGGGCGG CGTGTTCGCG TTGTGGTCCA ACGACCCGCC CGACGAACAG
TTCACCGCCG TCCTGGGCGA GGTCTTCACC GATGTCGCCG CCCACGTCGT CAGTTTCCCC
AACCACCTCC AGGACCGGGA TTCGTCCAAC ACCGTCTACA CCGCACGGAC CCGCTGA
 
Protein sequence
MRARFEELDW RETPMGELSL RRRVEPSLKV DVYEVKLGDE FLMSSLFTVA EIELARLGLA 
AATGTGLDVV VGGLGLGYTA RAALADERVD RLLVVEALDA VIDWHQRELL PHADELTGDG
RTGFVNGDFF ALAADPRGFD PATPGRRFDA VLLDVDHSPR HVLHPSHAAF YTPDGLRALA
AHLHPGGVFA LWSNDPPDEQ FTAVLGEVFT DVAAHVVSFP NHLQDRDSSN TVYTARTR