| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1520 |
|---|
| Symbol | |
|---|
| ID | 8882708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1606937 |
|---|
| End bp | 1608235 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_003510317 |
|---|
| Protein GI | 291299039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.357665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACA GTGCCCAGTC GTCTCAGCCC GTCTCGCTCA TGACGGATCA CTACGAGTTC
ACCATGGTCT CGGCGGCCCT GAGCGACGGT ACCGCTGAGC GGCCCTGTGT GTTCGAGGTG
TTCGCCCGTC GGTTGCCCAC CGGGCGGCGG TATGGGGTGG TGGCCGGGAT CGGGCGGTTG
GCCGAGTTGT TGCCGGGGTT CCGGTTCAGT GAGGCCGACG TGGAGTTCCT GCGGTCGAAC
GGGGTGGTCG ACGAGGCGAC GGCGCGGTGG TTGGCCGACT ATCGGTTCGG GGGCGACATT
GACTGTTACA ACGAGGGGGA GCTGTTCTTT CCCGGGTCGC CGATCTTGAC GGTGTCGGGG
ACCTTCGCCG AGTGCGTGCT GTTGGAGACG CTGATCCTGT CGGTGCTCAA CCACGATTGC
GCGATCGCGG CGGGGGCGGC TCGGATGGTG ACGGCGGCGC GGGGGCGGCC GTTGATCGAG
ATGGGTTCGC GGCGTACTCA TGAGGACGCC GCGATGGCTT CGGCGCGGGC CGCGTACTTG
GCGGGGTTCA CCACGACGTC GAACCTGGCG GCGGGAAGGC GGTACGGGAT TCCGACCGCG
GGTACTTCGG CGCACGCGTT CACGTTGCTG CACAACGACG AGCAGGCCGC GTTCGCGTCG
CAGGTGGCGA AGTTGGGTGT GGACACGACG CTGTTGGTCG ACACCTATGA CATCACCCAG
GGCATCCGCA ACGCGGTGGC CGCCGCCGGG ACCCGGTTGT GGGCGATTCG CATCGACTCC
GGGGACCTGG ACGTGATGGC CCACCATTCC CGGCAGTTGC TGGACTCGTT GGGCGCCACC
GATACCAAGA TCGTGGTGTC GGGTGATCTG GACGAGTACG CGATCGCGGC GCTGGCCGCG
GCCCCGGTGG ACATCTACGG GGCGGGGACG GCGGTGGTGA CCGGTTCGGG GGCGCCGACC
GCGAACCTCG TGTACAAGCT GGTCGAAGTG GACGGTTCGC CGGTGGTGAA GCGGTCCGAG
AACAAGGCGA CCGTCGGTGG CCGCAAGACC GCCGTGCGGC GGCACAAGCC CACCGGGACG
GTCGTGGAGG AGGTCGTGGT GTCCCAGGGG ACCCCCGAAC CGCAGCCGGG TGATCGGCCG
CTACAGCGGG CGCTGGTGCG CGGTGGGGAG CTGGTCGCCG ATCTGCCGGG GCTCGACGAC
TCCCGGGAAC TGTTGCGGCA GGGGCTGATC GCGATTCCGT GGGAGGGCCT GAAGCTGTCG
CCCGGTGACC CCAGTGTTCC GGTCGTGATG CTGAGCTAG
|
|---|
| Protein sequence | MPNSAQSSQP VSLMTDHYEF TMVSAALSDG TAERPCVFEV FARRLPTGRR YGVVAGIGRL
AELLPGFRFS EADVEFLRSN GVVDEATARW LADYRFGGDI DCYNEGELFF PGSPILTVSG
TFAECVLLET LILSVLNHDC AIAAGAARMV TAARGRPLIE MGSRRTHEDA AMASARAAYL
AGFTTTSNLA AGRRYGIPTA GTSAHAFTLL HNDEQAAFAS QVAKLGVDTT LLVDTYDITQ
GIRNAVAAAG TRLWAIRIDS GDLDVMAHHS RQLLDSLGAT DTKIVVSGDL DEYAIAALAA
APVDIYGAGT AVVTGSGAPT ANLVYKLVEV DGSPVVKRSE NKATVGGRKT AVRRHKPTGT
VVEEVVVSQG TPEPQPGDRP LQRALVRGGE LVADLPGLDD SRELLRQGLI AIPWEGLKLS
PGDPSVPVVM LS
|
|---|
| |