Gene Snas_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1516 
Symbol 
ID8882704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1602779 
End bp1603468 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003510313 
Protein GI291299035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.208877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGCG TGGACGCTAG CGAACAGCCC CAACGAATGC CGCATGGATA CTGCAACGAC 
ACCGTTCACC ACGACGACGC GGTGATCAAA CGGTTCACCG GCCCCGACGC CGCCGCCCGA
GCATCCACTG AGGTCCGTGC CCTGCGGGCG GCGTTTCCGA CCGTGCCGGT GCCGCAGGTC
AAGGCGGCCT CGGACGCCGA GATCACCTGC GAGTTCGTGC CCGGGGTCCA CGGCCAGGAC
CTCATCGGGC CCGACACCGC CGCGCGGCTG CTGGCCGAGT GCGGCCGGGT GCTGGCCACG
ATCCACGCCG TCCCGGTCGC GGCGGTGCAG GCCGAACCGC ACCCGGCGGG TGTCCTGATC
CACGGCGACT TCGGGCCGCA GAACATGCTG TTCGACAAGG AGACGCTGAC GGTGGCGGCC
GTCCTGGACT GGGAGTGGGC CCATATCGGG CAGCCCCTTG AGGACCTGGC GTGGTGCGAG
TGGATCGTGC GCAGCCATCA CGCCGACTGT GTGGACGCGT TGCCGCACCT GTACCACGGT
TACGGTGCGC CGATGCCGCC GTGGCCGCGC CGTCAGGCCG CGATGCTGGG CAAATGCCGT
GCCATGCGGC AGTTCGGGGC GCGGCGGCAG GACGGTTCGG CGACGGTGTG GCAGCGACGC
ACCGCGATCA CGCAGGCGTG GCGGGAATAA
 
Protein sequence
MYGVDASEQP QRMPHGYCND TVHHDDAVIK RFTGPDAAAR ASTEVRALRA AFPTVPVPQV 
KAASDAEITC EFVPGVHGQD LIGPDTAARL LAECGRVLAT IHAVPVAAVQ AEPHPAGVLI
HGDFGPQNML FDKETLTVAA VLDWEWAHIG QPLEDLAWCE WIVRSHHADC VDALPHLYHG
YGAPMPPWPR RQAAMLGKCR AMRQFGARRQ DGSATVWQRR TAITQAWRE