Gene Snas_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1506 
Symbol 
ID8882694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1590154 
End bp1590945 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510303 
Protein GI291299025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.168782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCG TCGACAGCTA CTTCGTCCGG CTCGACGACC GGCGGTTCCG GCCGACCCGG 
CTGACCGGTG GTGCCTGGAC CACCAGCGAA CAGCACATCA GCCCGATGAT CGGCCTGATC
ACCCACGCGG TGGAACGGTT CTGCGCCGAC CGCGGCCCCG ATCGGCTGGA GATCAGCCGC
ATCAGCGTCG ACATCCTCGG CGTGCTCACC CTGGACGAGT TCAGCGTCGA CGTCGAGGTC
ACCCGGCCCG GCCGCACCAT CGAACTGCTC GAAGCGGTCG TGGTCTCCGG CGAGAGGCCA
GCGGTACGGG CCCGGATCTG GCGCTCGATC ACCCAGGACA CGGCGGGCAT CACCGGCGGC
GAGGACGAAA CGCTGCCCGC GCCCGAGACG GTGGAGCCGA TCGACCTGAC CGGCGTGTGG
CCCGGCGGCT ACATCGAATC GCTGGCGGCC CGTCCGGTCG GGGCGGTCAA ACCCGGCCGC
GCGACCGTGT GGATCGCGAC CCGGGCGGTG CCGGTGCCGG GAGAACCCGT CAGCGACTTC
GCCCGGCTGA TGGGCCTGGT CGACACCGCC AACGGCCTGT CGGTGCGGGA AAGCCCGGAC
AGCTGGCTGT ACCCGAACCT CGACCTGACG ATCCACCTGT TCCGGCGGCC CAGCGGAGGC
TGGCTGGGGC TGGACACCAC CGTCGTGTTC GGCGCGGCGG GCCACGGCGT GACCAGCAGC
CACCTGCACG ACACCACCGG CCACTTCGGA TACGCGCAGC AGAGCTTGAC CATCCGCCGC
CGCACCGCCT GA
 
Protein sequence
MTSVDSYFVR LDDRRFRPTR LTGGAWTTSE QHISPMIGLI THAVERFCAD RGPDRLEISR 
ISVDILGVLT LDEFSVDVEV TRPGRTIELL EAVVVSGERP AVRARIWRSI TQDTAGITGG
EDETLPAPET VEPIDLTGVW PGGYIESLAA RPVGAVKPGR ATVWIATRAV PVPGEPVSDF
ARLMGLVDTA NGLSVRESPD SWLYPNLDLT IHLFRRPSGG WLGLDTTVVF GAAGHGVTSS
HLHDTTGHFG YAQQSLTIRR RTA