Gene Snas_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1502 
Symbol 
ID8882690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1585569 
End bp1586597 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content74% 
IMG OID 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_003510299 
Protein GI291299021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.699893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.864188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGA TCGACGAACT TCCCGACCGG GCCCGCGAAC TGCTGCCGCC GCCGGTGACC 
GAGTACTTCG GCCAGGGCGC GGCGGCGGGG ATGTCCACCG CCGAGGCCGC AGCAGCCTGG
GACGCGCTTC GGTTGCGGCC CAGAGTGTTG CGGGACGTGT CCACCGTGTC CACGGCCACG
ACGGTGCTGG GGCAGCCGGT CGACACCCCG GTACTGGTGG CGCCGACGAC CTTGCAGCGG
CTGGCCCACG ACGAGGGTGA GTCGGCCACG GCTCGCGGCG CCGCGAGCGC CGGTTCGCTG
CTGGAGGTGT CCACCAACGC GGGCACCCGG TTCGAGGTGC TGGGGCGGCA GGGCGCGCCG
TGGTGGGTGC AGGCGTACAT CGTCCGCGAC CGGGGCTTCA GCGTCGAGGT CCTGAAGCGG
GCCAAGGCCG CCGGTGCCGG GGCGGTGGTG CTGACCGTCG ACACTCCCGA GGTGGGGCAC
AAGCTCCAGG CCGGGGACAG CGTGTGGGAC CTGGTGACCG GCGATCAGTT GCAGGCCAAC
CTGGACACCG ACGGGCTGCC CGACGGCGCC CTCGACAAGG CCCGCGATCT GACCTTCGCC
GACATCGGCT GGCTGCGCGA GACCGTGGGA CTTCCCGTGG TGGTCAAGGG AGTGCTGCGC
GGCGACGACG CCCGCGAATG CGTGGCCGCC GGGGCGGCGG CGGTACAGGT GTCCAACCAC
GGTGGCCGCC AGCTCGACGG GGCCGTGTCC ACCGCCCGCG CGCTGCCGGA GATCGTCCGG
GCCCTGGACG GCACCGGCGC CGAGGTGTAC GTCGACGGCG GACTGCGGCG CGGCTCGCAC
ATCCTGGCGG CCCTGGCACT GGGCGCCACG GCGGTGTTCG TCGGCAGGCC GGTGCTGTGG
GCGCTGACGG TGGACGGCGC GGACGGGGTG CGGCGGCTGT TGGCCGACCT GACCGGCGAA
CTGCGGCACG CGATGACGTT GGCGGGCGCC GCCAGCCTCG ACGACCTGGC CCCCGACCTG
GTGGCCTGA
 
Protein sequence
MRWIDELPDR ARELLPPPVT EYFGQGAAAG MSTAEAAAAW DALRLRPRVL RDVSTVSTAT 
TVLGQPVDTP VLVAPTTLQR LAHDEGESAT ARGAASAGSL LEVSTNAGTR FEVLGRQGAP
WWVQAYIVRD RGFSVEVLKR AKAAGAGAVV LTVDTPEVGH KLQAGDSVWD LVTGDQLQAN
LDTDGLPDGA LDKARDLTFA DIGWLRETVG LPVVVKGVLR GDDARECVAA GAAAVQVSNH
GGRQLDGAVS TARALPEIVR ALDGTGAEVY VDGGLRRGSH ILAALALGAT AVFVGRPVLW
ALTVDGADGV RRLLADLTGE LRHAMTLAGA ASLDDLAPDL VA