| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1461 |
|---|
| Symbol | |
|---|
| ID | 8882649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1548255 |
|---|
| End bp | 1549460 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003510258 |
|---|
| Protein GI | 291298980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.586682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC AAGCCACCCC CGTCACGCTC AGAGGGCCGA CGGCGCTGTC GGAACGTGCC
TTCGCTCCCG ATTTCGCGCG CGGGATGTTG TTGCTGTTCA TCGTTTTGTC CAATACCGGA
CTGCACCTGT ACGGGGCCGG ACTCGTCTCC GACTCCACCG TGGACTCCGT GACCCGGTTC
CTGATGCCGG TGTTCGTGGA CGTCCGCTCG TATCCGCTGT TCGCGTTCCT GTTCGGGTAC
GGCATCACGC AGCTGGCCAC CCGGCAGCGT GGGGCCGGGG TTGAGGAGTC CCGGGTGCGG
CGGTTGCTGC GGCGGCGGGG GTGGTGGCTG TTCGGGTTCG GGTTCGTGCA CGCGGCGCTG
TTGCTGGGGT CGGAGGTGCT GGCCGCTTAC GGGCTGATCG GGCTGGTCCT GGTGGGGCTG
TTCCTGAAGC GGAGCGATCG CACGTTGCTG GTGTGGGCGG GGATCGGCGG GTTCATCCTC
GCGGTTCTGT TCGCGTCGTC GGCGGTGGCG CTGGTGACGA CCGAGCCGCC GAGCGGTTCG
TCGGGTGGGG CGGACGCGCC CGAGAGCATG TTCGGGGTCG ACAACGGCAG CTGGCTGGTC
GCGGGCGCCG GACGGTTGAT CAGCTGGCTG TTCCTGTTGG GCGTCAACGG TTTCGGTGTC
GTGATGCCGA CCGCGATCCT GTTGGGGATG CTGGCGGCCC GGCGCCGGGT GCTGGAGGAA
CCGGGACGGC ACCTGCGGTT GTTGTACGCG ATGGCGATCG GCGGGATCGG TTTCGGGCTG
TGCGGTTCGC TGCCGGTCGC GTTGTCCGGT TACACCGCCA GCGATATCCA TCAGTCCGGT
TACGGGCTGC TGCTGTTCGG TCTGCAGTGG AGCTCCGGCC TGGCCGGGGG CCTGGGATAC
GTGGGCCTGT TCGGGTTGCT GGCGCACTGG CTGTCGTCGC GGGCCGCTCG CGGCGGGCCG
GTCCTGGCGA TCACCGCGCT GGGGAAGCGT TCGCTGTCGG GCTATCTGAC GCACTCGGTG
CTGATGGCGC CGCTGCTGGC CGCGTGGGGT TTCGGCCTGG GCGGTGAGCT GTCGCGGGCC
GGTATGGCGG CGTTCGGCAT CGGGCTGTGG CTGGTCACCG TCGTGGCGGC CTACCTCTTC
GAGAGGGCCG GGCGACGCGG CCCGGCCGAG GTGCTGTTGC GCGGGCTCGT GTACGGCAGG
CGTTAG
|
|---|
| Protein sequence | MTTQATPVTL RGPTALSERA FAPDFARGML LLFIVLSNTG LHLYGAGLVS DSTVDSVTRF
LMPVFVDVRS YPLFAFLFGY GITQLATRQR GAGVEESRVR RLLRRRGWWL FGFGFVHAAL
LLGSEVLAAY GLIGLVLVGL FLKRSDRTLL VWAGIGGFIL AVLFASSAVA LVTTEPPSGS
SGGADAPESM FGVDNGSWLV AGAGRLISWL FLLGVNGFGV VMPTAILLGM LAARRRVLEE
PGRHLRLLYA MAIGGIGFGL CGSLPVALSG YTASDIHQSG YGLLLFGLQW SSGLAGGLGY
VGLFGLLAHW LSSRAARGGP VLAITALGKR SLSGYLTHSV LMAPLLAAWG FGLGGELSRA
GMAAFGIGLW LVTVVAAYLF ERAGRRGPAE VLLRGLVYGR R
|
|---|
| |