Gene Snas_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1414 
Symbol 
ID8882601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1500058 
End bp1500774 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003510214 
Protein GI291298936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0201089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTGC TGACCCTGTC CGGTGTACAC CGCACTCATG GTCGAGGAGA AACCGCCGTG 
CGTGCCCTGC GCGGCGTGGA CATGAGCGTG GGCCCCGGAG AACTGGTCGC CGTCATGGGA
CCGTCAGGGT CGGGAAAGTC CACTTTGCTG AATATCGCCG GAGGCCTCGA CATGCCCACC
TCCGGCGAGG TCAGCGTCGA CGACACCCCA CTGGCCTCGC TGCCCAAGCG GGCCCTGTCA
CGACTGCGCC GACGGTCCAT CGGCTACGTC TTCCAGAACT TCAACCTGGT TCCCAGTCTC
ACCGCGATCG AGAACGTCGC GCTGCCCCTG GAACTGGACG GCGTCCCGGT ACGCAAGGCC
CGCGCGGCCG CGGCCGGGTC GCTCGCCGAC GTCGGGGTGG GTGACCTGGC GGAACGGTTT
CCCGACGACA TGTCGGGCGG TCAACAGCAG CGGGTCGCGA TAGCGCGCGC CGTGGTGGGC
GAGCGGCGCC TCGTCCTGGC CGACGAACCC ACCGGCGCGC TGGACTCCCG TACCGGGGAG
TCGGTGCTGC GGCTGCTGCG CGCCCGCTGC GACTCCGGCG CCGGCGGGGT GCTCGTCACC
CACGACGCCC GGCACGCCGC CTGGGCCGAC CGGGTGGTCT TCCTGCGCGA CGGGCGGGTC
GTGGACGCCG CCGGACCGCT GCCCAGCGTC GATTCGCTGC TGGAGGGCAC CACGTGA
 
Protein sequence
MTLLTLSGVH RTHGRGETAV RALRGVDMSV GPGELVAVMG PSGSGKSTLL NIAGGLDMPT 
SGEVSVDDTP LASLPKRALS RLRRRSIGYV FQNFNLVPSL TAIENVALPL ELDGVPVRKA
RAAAAGSLAD VGVGDLAERF PDDMSGGQQQ RVAIARAVVG ERRLVLADEP TGALDSRTGE
SVLRLLRARC DSGAGGVLVT HDARHAAWAD RVVFLRDGRV VDAAGPLPSV DSLLEGTT