| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1413 |
|---|
| Symbol | |
|---|
| ID | 8882600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1497281 |
|---|
| End bp | 1500061 |
|---|
| Gene Length | 2781 bp |
|---|
| Protein Length | 926 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003510213 |
|---|
| Protein GI | 291298935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.232958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGT CGTCCCTGCG GGTGGCATTT CGCATCGCGC GCCGGGACGC CCGCCACACG
CTGGGACGCT CGGTGCTCGT GGTGGTTCTG CTGGCGCTGC CGGTCTTCGC CGTCACCGTG
GGGGCGAGCC TGCTCGACAG CTTCGAGCCG ACCCCGACCG AGAAGGCCAC CCGGGACATG
GGCGAGGCCG ACGCCATCGT GGACTGGGAG TACGACTCGC CGATCGTGCA GGCCCCCACC
GAACGCGAGG CCGGGGTCAA ACCCGACGGC GGCGACGCCA AGACCGCCGA ACACTCCAAG
GCCGAGATCC TGGCGAAACT GCCCGAGGGC AGCCGCCTGG TCCAGATCAC CGAACGCGAC
GTCACCGCGC AGACCCCGTC CGGGCAGACG AAGCTCGTGT TCCGGGGCAT CCCGTTGCGG
GACAAGCTGA CCGAAGGAAT CCTGTCCGTC GTGGACGGTA GGGCGCCCGG CAAGAACCAG
GTGGCGCTGT CGCGGGCGGC GGCCGACCAC CTCGGCCTCG ACATCGGCGA CACGATGCGG
CTGCGGGAAC CGGCCGGACG CTTCCCGGTA GTGGGGATCG TGGAGGACCC GGCCGCCATC
GACGTCGAGT TCGCCGTCGC CCCGCCGGGC ACCGTCGACG GCAACCACGA ACGCTGGCTC
GCCGACACCC CCGGCGACAT CGGCTGGGAC CAGGTGCGCG AGTACAACGC CGACGGCATG
GCCGTGTACT CGCACGCCGT GGCCGCCGAC CCGCCCGCGC CGCCACCGCA GTTCACCGTC
GAACCCGAGC CCCGGACCCA GACGCTGATC ATGATCGGTT TCCTCATCGT CATGATCGGC
CTGGAGGTGG TGCTGCTGGC CGGTCCGGCC TTCGCCATCA GCGCCAAACG CCGCACCCGC
GAGTTCGGGC TGCTGTCGGC CAACGGCGCC ACCCCGGGAC AGGTGCGGCA CACCGTGCTG
GCCGCCGGGA TCCTGCTGGG CGGCCTGGCC GCCGTCATCG GCATCGCGCT GGGGGTGGCC
ACCACCTTCG CGGTCACACC GTTCGCCGAG GACATCGTCG GCGCCCGGAT GGCGGGGCTG
CGGTTCTGGC CCGCCCTGAC GATCCCGGCC GCGCTGCTGG CGATCCTCAC CGGACTGCTG
GCGGCGCTGG TGCCCGCCTT CACCGTGGCC CGGCAGAGCG TCGTGGCGGC ACTGTCCGGG
CGACGCGGCG ACACCCGGTC CCGCAAACTC TGGCTGATCA CCGGGCTGAG CCTGGTGGGC
GCGGGTGTGG TGTGCGCGCT GGTCGGGGTG GAGACGCTGG GCGCGCTGCT GCCCGCCGGG
GTCGTCATCG CCGAGTTGGG GCTGGTGCTG TGCACCCCGG CGCTGGTGGG CCTGATCTCG
CGACTGGGCC GCCACCTGCC GCTGTCGCCG CGGCTGGCGC TGCGCGACGC CGGCCGCAAC
CGCTCCTCCG CCGCCCCGGC GATCTCGGCG ATCATGGCGG TGGTGGCCGC GGGCGTGGCG
GCGACGATGT TCCTGGTCGG CGACACCGAG CGGGTCACCG ACGGCGCCGG ACGCATCGCT
CCCATCGGTT CGGTCACCGC CGACGTCCAG GTCTCCTACG ACGACCCCGA CCATCCCAAG
GGGACGGACA AGGCCCGCAA GGCGCTGGAA CAGGCCGCCA ACGACACCGC CGCGGCGATG
CGCGAGCACC TGCCGGTCAC CCAGGTGCAC CAGTTGCCGT CCATGACCTG CCGAGCCGAC
AAGCTCGCCG ACTTCTGCCA GGTCAAGGTC ACCTACCCGA AGCACAAGAC CTGCCCGTTC
GACGTCAGTG ACGGCACCGT CCTGCCCGAG GCCAAGCAGG CCGAGGCCGC CGCGAACCCC
AACTGCAAGG CGCGGGCCGA CGGCGCGGTC AGTTCGCTGT TGACCTACGG GACCTTCGTC
GTCGACGGCG GACAGGTGGG TGCGCTGACC GGGGCCGACC CCGCCGACGT CGCCGCGGCC
ACCGAGGTCC TCGAGGCCGG GGGCGTCGTC GTCAACGACC CCGACCTCGT CCAGGACGGC
AAGGCCACCG TCGAACTGCG CCGCCTCAAC GGCGGCCGCG AGGTCAAGCC CGTCGACGCG
ATGGACCTGC CCGCCCACGC CCTCGACACC GGCAGCCACA ACCGGGAGCA GCTGCTGGTC
AGCCCGCAGG CGGCCAAAAA GCTGAACCTG ATCGAGGGCG ACACCATGGA GGTCTTCGGC
GCCACCGACC GGATGCCGAC CGTCGCCGAG GAGGAGGCGT TCATCCAGGC GCTGTCCGAC
AAGGGCATCA ACGGCGAGAC CGCGGGCTCC TCGGCCGAGG ACGGGCAACC GCTGGTGCTG
GCCAACGTCG TCAAGGAACC CGCCCCGCCG CAGATGATGC GGCTGATCCT GACGCTGCTG
GCGATCCTCA GCTCGGCGCT GGCGCTGGCG GCCACCGCCG TGGCCACCGC GCTGACCGCC
GCCGAGGCCC GCGCCGACCT GACCACCCTG GGGGCGATCG GGGCCTCCCC GTCGATCCGC
CGCAAACTCA GCCTGTGCCA GGCCGGGGTC ATCTCGATCC TGGGCACCGT CCTGGGCGTG
GCCGCCGGGG TCGGTGCCTG CTGGGTGGTG ATGTCGGCGC TCAACGCGCA GCTCGACGAC
GTCTACCCGC GCGAGCACCT GTTCTCCCCG ATGCCACCCT GGAACCACAT CCTGATCGCG
CTGGTGGCCG TACCGGCCAT CGCGATGCTC GGCGCCGGAC TGCTGACCCG ATCCCGGCTG
CCCAGCGAAC GACGGGAATG A
|
|---|
| Protein sequence | MSLSSLRVAF RIARRDARHT LGRSVLVVVL LALPVFAVTV GASLLDSFEP TPTEKATRDM
GEADAIVDWE YDSPIVQAPT EREAGVKPDG GDAKTAEHSK AEILAKLPEG SRLVQITERD
VTAQTPSGQT KLVFRGIPLR DKLTEGILSV VDGRAPGKNQ VALSRAAADH LGLDIGDTMR
LREPAGRFPV VGIVEDPAAI DVEFAVAPPG TVDGNHERWL ADTPGDIGWD QVREYNADGM
AVYSHAVAAD PPAPPPQFTV EPEPRTQTLI MIGFLIVMIG LEVVLLAGPA FAISAKRRTR
EFGLLSANGA TPGQVRHTVL AAGILLGGLA AVIGIALGVA TTFAVTPFAE DIVGARMAGL
RFWPALTIPA ALLAILTGLL AALVPAFTVA RQSVVAALSG RRGDTRSRKL WLITGLSLVG
AGVVCALVGV ETLGALLPAG VVIAELGLVL CTPALVGLIS RLGRHLPLSP RLALRDAGRN
RSSAAPAISA IMAVVAAGVA ATMFLVGDTE RVTDGAGRIA PIGSVTADVQ VSYDDPDHPK
GTDKARKALE QAANDTAAAM REHLPVTQVH QLPSMTCRAD KLADFCQVKV TYPKHKTCPF
DVSDGTVLPE AKQAEAAANP NCKARADGAV SSLLTYGTFV VDGGQVGALT GADPADVAAA
TEVLEAGGVV VNDPDLVQDG KATVELRRLN GGREVKPVDA MDLPAHALDT GSHNREQLLV
SPQAAKKLNL IEGDTMEVFG ATDRMPTVAE EEAFIQALSD KGINGETAGS SAEDGQPLVL
ANVVKEPAPP QMMRLILTLL AILSSALALA ATAVATALTA AEARADLTTL GAIGASPSIR
RKLSLCQAGV ISILGTVLGV AAGVGACWVV MSALNAQLDD VYPREHLFSP MPPWNHILIA
LVAVPAIAML GAGLLTRSRL PSERRE
|
|---|
| |