Gene Snas_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1399 
Symbol 
ID8882586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1483397 
End bp1483873 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003510199 
Protein GI291298921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACAG GACGCGGCTA TCCGGGCACC GCGGCGATCG AGACCCTGGT GGCGATGCGT 
CGCGCCCGCG ACCTCATCGA CGGCCACTAC TCCCGGCCGC TCGACCTGGA CGCGATGGCC
GCTGCCGCCG GATACAGCCG GTTCTACTTC GTGCGGGCGT TTCGCGCCGC CTACGGCACC
ACTCCCAGCC GCTACCTGAG CCGTCGCCGC GTCGAACGGG CCCAGGAACT GCTGCGGGTC
GCGAACCTCA CCGTCACCGA GGTCTGTTAC CTGGTGGGTT TCGCCAGCCT CGGCTCCTTC
AGTTCCCGGT TCACCGAACT GGTCGGCGTC AGCCCCTCGG AGTTCCAGCG CCGCGCCCAC
CGCGCGGGCC CGCCCCCGAT CCCCGGCTGC TTCCTGCTGA TGTCCGCCGG ACCCATGCCC
GCCGACGCCG CGAAGAGCGC AATTCAGGAG AAGCCTTCCC CGTCCGCCAC CCCTTAG
 
Protein sequence
MATGRGYPGT AAIETLVAMR RARDLIDGHY SRPLDLDAMA AAAGYSRFYF VRAFRAAYGT 
TPSRYLSRRR VERAQELLRV ANLTVTEVCY LVGFASLGSF SSRFTELVGV SPSEFQRRAH
RAGPPPIPGC FLLMSAGPMP ADAAKSAIQE KPSPSATP