Gene Snas_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1389 
Symbol 
ID8882576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1472289 
End bp1473332 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510189 
Protein GI291298911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG GCGGTAAAGG CGGAGACGGC GACACCCGAG GGGGCGGGGG TGAGAACGGC 
AACCAGAACA ACAAAGGCGG GAATGACGAG GGCGGCAACG AGATCGAAGT CCCCAGCATG
GAGGAACTGG ACGGACTGGC CGACAAGATC GCGGACGAGT TCGTCAGCCA GGGGATGAAG
ATCTACCAGA CGCTCGACCC GGAGACCCGC CCCTACCCGG ACGAGTACCG AGAAGGGCTG
CGAAGCCAGG TCGAGGAGCT GCCGGAGAAG TTCAAGGAGT TCTACACCCC GGGGCCGGGC
GAGTTCACCG CGAAGTTGGA CCTCATCGAC GAGCTCACCA GGAAGCTCGA CACCCAGGCG
GGTGATTTCA ACACCGGCGA GATCAGCGGG CATGTCCACG ACGCGATGGA CAACATGGGC
GAGTGGGAGG GCGCGTTGAG CATTTCCTTC CGCAAGGGGT ACCTGGATCC CCTGTACGAG
GGGATCATCC CCAACCACGG CAGGGTGCTG GCCCTGTTGC ACGACAATTT TCAGGCGATG
CGCGACATCT ACGCCGAGGG GCGCAAGAGT CTGAAGAAGA TCGGTGAGGA TGGTCTGTCC
GCTATGGAGC AGGCCGACGA CGTCGACGGG GCCGCCGTGG TGACGGCGCT GACGGTGTTG
GCCGCCGCGT TCGGGCTCGG CTTCGCGGGG CTCGCCGCGG TGCCCGGTAT CGCGACGGCG
GCCGGGGTCG CCGGGGCGGC GGTCGCCGGT GGGCTCGCCG TGGCCTCGGA TCAGGCTCCG
GAGCCGGAGG AGATCCCGCT GGCCGGGAGT TCCGCCGAGG ATGTGCTGGT GAACATCTAC
GACGCGCTGA GCAAACTGGA GGATGACATC CTCACGAAGG AAGCCGAGCT CATCGACACG
ATCCTGCGGG GCTGCGATGA GACCCTGGAG CTCGTGGGTG ACACCACCGA GAACTCGATG
TTGGTTCCGA AGATGCCCGA TCTGGTCGGC ACCGCGCTGG ATGACTATCA CCAGATCTCC
GAGGGTCTGA ACCAGTTCGA CTAG
 
Protein sequence
MSRGGKGGDG DTRGGGGENG NQNNKGGNDE GGNEIEVPSM EELDGLADKI ADEFVSQGMK 
IYQTLDPETR PYPDEYREGL RSQVEELPEK FKEFYTPGPG EFTAKLDLID ELTRKLDTQA
GDFNTGEISG HVHDAMDNMG EWEGALSISF RKGYLDPLYE GIIPNHGRVL ALLHDNFQAM
RDIYAEGRKS LKKIGEDGLS AMEQADDVDG AAVVTALTVL AAAFGLGFAG LAAVPGIATA
AGVAGAAVAG GLAVASDQAP EPEEIPLAGS SAEDVLVNIY DALSKLEDDI LTKEAELIDT
ILRGCDETLE LVGDTTENSM LVPKMPDLVG TALDDYHQIS EGLNQFD