Gene Snas_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1386 
Symbol 
ID8882573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1468821 
End bp1470386 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content66% 
IMG OID 
ProductD-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase 
Protein accessionYP_003510186 
Protein GI291298908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.66505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.403986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAAAC GCACAGTAAC CCACGCCGCC GTCGCCCTGG CCGTGGCCGG TGTCGTGGCC 
ATCGCCGGAA CCGTTGTCGC CCATGCCCAG GAGCCCGACG ACGATCTCGC CAAGGCCCTT
GACACCATCC TGGAGGACAA GCGCCTCGAC GACTCCCAGA TCGGTGTCGT CGTCGCCGAG
GCCGAGGGCA ACAAGACCAT CTACGACCAC AATGGCAATA TGCGGGCGAT TCCCGCGTCC
AACAACAAGA TCCTGACCTC CGCCGCCGCG ATGGACGCGC TGGGCGGCGA CTACCGCTTC
GACACCGACC TCGCGTCCAA GGCCAAGCCC CACAACGGAA GCCTGCGCGG CGACCTCTAC
CTGCGCGGCA CCGGTGACCC CACGATGCTC GCCGCCGACT ACGAGAAGCT CGCCGCCAAG
CTGGCCAAGG CCGGGGTCAA GAAGGTCCGC GGTGACCTGG TCGCCGACGA CACCGCCTAC
GACGACGTCC GGTTGGGTAC CGAATGGGGC TGGGAGGACG AGCCGTACTA CTACGCCGCC
CAGACCTCGG CCCTGACCGT CGCCCCCGAC GAGGACTACG ACGCCGGAAG CGTCATCGTC
AACGTCGATC CCGGTGCCGC CGAAGGAGAC AAGGCCAAGG TCACCCTGAC CCCGCCCACC
GGTTATGTCG AAGTGGACAA CACCGCCAAG ACCGGCGGCG AGACCGACCT GACCGTCGAC
CGCAAGCACG GCACCAACAT CATCACCGTG TCGGGGACCA TCGCCGTCGG CGACGAGACC
ACCAGCGAGT ACATGTCGGT CAACGAACCC ACCGGCTACG CCGCCGACAT CTTCGCCCGC
GCCCTCAAGG CCAAGGGCAT CAAGCTCACC GGCGACATCC GGCTGGGCGA GACCACCCCC
AGCGGCGCCA AGACCCTGGC CGAACGCCAG TCGATGCCGC TGTCGGAGCT GCTGATCCCG
TTCATGAAGC TGTCCAACAA CATGCACGCC GAAACCCTCG TCAAGGCCAT GGGCCGCGAG
AAGACCGGCG AACAGGGCAG CTGGGACAAC GGCCTGCCGG TGGTGAAGTC CTTCCTGGAC
AAACAGGGCC TCAGTACGTC TCGGCTGCGG CAGGCCGACG GCTCCGGCAT GTCCCGCTGG
AACCTCATCC CGCCGGACCA GTTCACCACG CTGCTGTCCA AACTGCGCGA CGCGAAGTGG
TTCGACACCT GGTACAAGTC GATGCCCATC GCCTGCGAAC CCGACCGGCT CGTCGGCGGC
ACGCTGCGCA GCCGCATGTG CGACACGCCC GCCGAGAAGA ACGTCTACGC CAAGACCGGC
TCGCTGACGT CCGTGACCGC GCTGTCGGGC TACGTCACCG ACGCCGACGG CCGTGAGCTG
GTGTTCAGCA TCGTCACCAA CGACTATTTG ACCGGCGTGA AGGACATCGA GGACAAGATC
GCCGTGACCC TGGCGTCCTA CTCGCAGGGC GAATCCCTCG ACAAGGACGG AGTCAAGGTG
CCACAACCGG AGAAAGAGGC ACCTTCCGGC CTTGAATGCT CGTGGGTCAA GCCAATCGCC
TGCTAA
 
Protein sequence
MRKRTVTHAA VALAVAGVVA IAGTVVAHAQ EPDDDLAKAL DTILEDKRLD DSQIGVVVAE 
AEGNKTIYDH NGNMRAIPAS NNKILTSAAA MDALGGDYRF DTDLASKAKP HNGSLRGDLY
LRGTGDPTML AADYEKLAAK LAKAGVKKVR GDLVADDTAY DDVRLGTEWG WEDEPYYYAA
QTSALTVAPD EDYDAGSVIV NVDPGAAEGD KAKVTLTPPT GYVEVDNTAK TGGETDLTVD
RKHGTNIITV SGTIAVGDET TSEYMSVNEP TGYAADIFAR ALKAKGIKLT GDIRLGETTP
SGAKTLAERQ SMPLSELLIP FMKLSNNMHA ETLVKAMGRE KTGEQGSWDN GLPVVKSFLD
KQGLSTSRLR QADGSGMSRW NLIPPDQFTT LLSKLRDAKW FDTWYKSMPI ACEPDRLVGG
TLRSRMCDTP AEKNVYAKTG SLTSVTALSG YVTDADGREL VFSIVTNDYL TGVKDIEDKI
AVTLASYSQG ESLDKDGVKV PQPEKEAPSG LECSWVKPIA C