Gene Snas_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1365 
Symbol 
ID8882552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1441282 
End bp1442538 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510165 
Protein GI291298887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.173694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGAC GCAACGTTCT GGCCGCCTCG GCGGCCGTGA CCACCGCCGG GTTGCTCGCC 
GGTTCCGCCC CCGCCGCCCA CGCCCGCAAC GGACGCAGGG TGCGCACCGG CTTCGCCAAC
CTCGCCGCCT CCGGGTACCG GGAGCTGCGG GGACAGCGGG TCGGGATCAT CTCCAACCCG
ACCGGCATCA CCTCCGACCT CAGCCACGAG GTCGACGTGA TGCACTTCGA CAGCGACGTC
GACCTGCGGG CGGTCTTCGG GCCGGAGCAC GGTTTCCGGG GCACCTCGCA GGCCGGTCAG
GGCGAGGACT TCTTCGAGGA CCCCAAGACC GGGCTGCCGG TGTACAACGC CTACAACGAC
CCGCAGAAGA TGAAGGACTA CTTCGCCGAG CGGGAGCTCG AGACCGTCGT GTTCGACATC
CAGGACGTCG GATCCCGGTT CTACACCTAC ATCTGGACCA TGTACCTGGC CATGGACGCC
GCGGCCCAGG CCGGGTGCCG GTTCGTGGTC CTCGACCGCC CCAACCCGAC CACCGCCAGC
AACGCCTACG GGCCGATCCT GCACGAGAAG TTCGCGACCT TCGTCGGGCT CAAACCGATC
TCGCAGCGGC ACGGCATGAC GGTCGGCGAA CTCGCCGAGT TGTTCAACGG CGAGTTCCTC
GACAACGCCG TCGACCTGAC CGTGGTGGAG ATGTCGGGCT GGCGGCGCCG GATGTCCTTC
GACGAGACCG GACTACCGTG GGTGCCGCCG TCGCCGAACA TGCCCCAGAT CGGCACCGCC
CGGCTGTACC CGGGCACCTG CCTGTTCGAG GCCAGCGCCC TGTCGGAGGG GCGCGGCACC
ACGCTGCCGT TCCAGCTGAT CGGCGCCCCC GACATCGACC ACAGGTGGGA GGAGGCGCTC
AACAAGCAGA AGATCCCGGG GGTGCGGTTC CGGGAGGCGT ACTTCGTGCC CACGTTCTCC
AAGTGGTCGG GCAAGACCTG CGGCGGCGTC GAAGTCCAGG TCACCGACTA CGACCGCTTC
GACCCGATCC GCACCGCGCT GGCCATGATC ATCACCCAGC GCGAGGTGTT CCCGAAATAC
GGCTGGCGCA CCGAATCCGA CCCCAACGCG CACCCGTGGA TCGACAAGCT CACCGGCTCC
GCCCAGGTCC GCAAGGCCAT CGAGGCGGGA GCCGACGTCG ACGAGGTCAT GGAGGGCTGG
AAGTCCGAAC TGGACGACTT CCGCGACGTC CGCGCCGAGT ACCTGCGATA CCGATGA
 
Protein sequence
MRRRNVLAAS AAVTTAGLLA GSAPAAHARN GRRVRTGFAN LAASGYRELR GQRVGIISNP 
TGITSDLSHE VDVMHFDSDV DLRAVFGPEH GFRGTSQAGQ GEDFFEDPKT GLPVYNAYND
PQKMKDYFAE RELETVVFDI QDVGSRFYTY IWTMYLAMDA AAQAGCRFVV LDRPNPTTAS
NAYGPILHEK FATFVGLKPI SQRHGMTVGE LAELFNGEFL DNAVDLTVVE MSGWRRRMSF
DETGLPWVPP SPNMPQIGTA RLYPGTCLFE ASALSEGRGT TLPFQLIGAP DIDHRWEEAL
NKQKIPGVRF REAYFVPTFS KWSGKTCGGV EVQVTDYDRF DPIRTALAMI ITQREVFPKY
GWRTESDPNA HPWIDKLTGS AQVRKAIEAG ADVDEVMEGW KSELDDFRDV RAEYLRYR