Gene Snas_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1363 
Symbol 
ID8882550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1438609 
End bp1439364 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID 
Productglycoside hydrolase family 25 
Protein accessionYP_003510163 
Protein GI291298885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC CATACCCTAA ATATCGAAGT ATGCGCACGT TTACAACGTT GTTGCTCAGT 
CTGGTGCTCG CCGCGACCCT GCTGGCGTTC GGCGCGGGCC CGGCGCAGGC CGACCCGGAA
GTCAAGGCCA ACCCGGAGGG GATCGACGTC TCCCACTACC AGGGAGCCAT CAACTGGGGA
GCGGTGCGCT CCGCCGGCAT CGAGTTCGCC TGGATCAAGT CCACCGAGGG AACCAGTTAC
AAGGACCCGC GGTTCAACAC CAACTACCCG GCCGCCCACG CCGCCGGGGT CATCCGGGGC
GCGTACCACT TCGCGCGGCC CGGCAGCTCC TCCGGCGCCA CCCAGGCCAA CTACTTCGCC
TCCTCCGGCG GCGCCTGGTC CGCCGACAAC CTGACCCTGC CCGGAGCCCT GGACCTGGAA
GCGGGCTGCC ACGGCCTGTC CCAGACCGCC ATGCGCAACT GGATCCTGGA CTTCTACAAC
ACCTACAAGT CGCGCACCGG TCGCGACGTC GTCATCTACA CCACCCGCAG CTGGTGGACC
AGCTGCACCG GCAACTGGAC CGGAATGGGA ACCCGCAGCC CGCTGTGGGT CGCCCACTGG
GGAGTGTCCT CTCCGGCCAT TCCGGTCGGG TTCCCGACCT GGACCGCCTG GCAGTTCACC
GACAACGGCC GCGTCAACGG CATCTCCGGA GCCGTGGACC GCAACCACTT CAACGGTTCC
CGTGATCGGT TGCTGGCGCT CGCCAACAAC ACGTAA
 
Protein sequence
MDTPYPKYRS MRTFTTLLLS LVLAATLLAF GAGPAQADPE VKANPEGIDV SHYQGAINWG 
AVRSAGIEFA WIKSTEGTSY KDPRFNTNYP AAHAAGVIRG AYHFARPGSS SGATQANYFA
SSGGAWSADN LTLPGALDLE AGCHGLSQTA MRNWILDFYN TYKSRTGRDV VIYTTRSWWT
SCTGNWTGMG TRSPLWVAHW GVSSPAIPVG FPTWTAWQFT DNGRVNGISG AVDRNHFNGS
RDRLLALANN T