Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1363 |
Symbol | |
ID | 8882550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1438609 |
End bp | 1439364 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | glycoside hydrolase family 25 |
Protein accession | YP_003510163 |
Protein GI | 291298885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCC CATACCCTAA ATATCGAAGT ATGCGCACGT TTACAACGTT GTTGCTCAGT CTGGTGCTCG CCGCGACCCT GCTGGCGTTC GGCGCGGGCC CGGCGCAGGC CGACCCGGAA GTCAAGGCCA ACCCGGAGGG GATCGACGTC TCCCACTACC AGGGAGCCAT CAACTGGGGA GCGGTGCGCT CCGCCGGCAT CGAGTTCGCC TGGATCAAGT CCACCGAGGG AACCAGTTAC AAGGACCCGC GGTTCAACAC CAACTACCCG GCCGCCCACG CCGCCGGGGT CATCCGGGGC GCGTACCACT TCGCGCGGCC CGGCAGCTCC TCCGGCGCCA CCCAGGCCAA CTACTTCGCC TCCTCCGGCG GCGCCTGGTC CGCCGACAAC CTGACCCTGC CCGGAGCCCT GGACCTGGAA GCGGGCTGCC ACGGCCTGTC CCAGACCGCC ATGCGCAACT GGATCCTGGA CTTCTACAAC ACCTACAAGT CGCGCACCGG TCGCGACGTC GTCATCTACA CCACCCGCAG CTGGTGGACC AGCTGCACCG GCAACTGGAC CGGAATGGGA ACCCGCAGCC CGCTGTGGGT CGCCCACTGG GGAGTGTCCT CTCCGGCCAT TCCGGTCGGG TTCCCGACCT GGACCGCCTG GCAGTTCACC GACAACGGCC GCGTCAACGG CATCTCCGGA GCCGTGGACC GCAACCACTT CAACGGTTCC CGTGATCGGT TGCTGGCGCT CGCCAACAAC ACGTAA
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Protein sequence | MDTPYPKYRS MRTFTTLLLS LVLAATLLAF GAGPAQADPE VKANPEGIDV SHYQGAINWG AVRSAGIEFA WIKSTEGTSY KDPRFNTNYP AAHAAGVIRG AYHFARPGSS SGATQANYFA SSGGAWSADN LTLPGALDLE AGCHGLSQTA MRNWILDFYN TYKSRTGRDV VIYTTRSWWT SCTGNWTGMG TRSPLWVAHW GVSSPAIPVG FPTWTAWQFT DNGRVNGISG AVDRNHFNGS RDRLLALANN T
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