Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1353 |
Symbol | |
ID | 8882540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1429009 |
End bp | 1430559 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003510154 |
Protein GI | 291298876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.241589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAAGGA GCACGACGCT GAGACTCGAA CTGAGTGGTC TGACCAAACG CTTCGGCGAC CTGGTGGCGA ACGACCACAT TGACCTGACA GTGGAGGCGG GTGAGATTCA CGCCCTGCTG GGCGAGAACG GCGCCGGCAA ATCCACCCTG ATGAACATGC TCTACGGGCT GCTGACGCCC AACGAGGGGC ACATAATCAT CGATGGCCGC AAGGTCGCCA TCACCTCCCC GGGCAACGCC ATCAAGGCGG GCATCGGCAT GGTGCACCAG CACTTCATGC TGGTCCCGGT GTTCACCGTC GCCGAGAACG TCATGCTCGG CCGCGAGATG ACCGACGGCC TCGGCGTCCT CAGCCGTCGC AAGGCCGCCC GGGCGGTGCG CGAGATCTCC GAGCGCTACG GGCTCGACGT CGATCCCGAC GCGCTGGTCG AGGACCTGCC GGTGGGCGTG CAGCAGCGCG TCGAGATCAT CAAGGCGCTG CTCAACGACT GTGACCTGCT GATCCTGGAC GAGCCCACCG CGGTGCTCAC CCCGCAGGAG ATCGACGAGC TGCTCGACAT CATGCGCGGG CTGCGCGCCG ACGGCAAGTC GATCGTCTTC ATCAGCCACA AGCTCAAGGA AGTCAAGGCC ATCGCCGACA AGATCACCGT CATCCGCCGC GGCGCGGTGG TCGGTGAGGC GGCGCCGACC GACTCCGAGA CCGAACTGGC GTCCATGATG GTCGGACGTT CGGTGAAGCT GACCGTCGAC AAGGATCCGG CCCAGCCGGG GAACCCGGCG CTGGTCATCG ATAACCTGAC CGTCGCCGAC TCGCGCGGCC ACCACGCCGT CGACGGCCTG TCGCTGACCG TCAACCACGG CGAGATCGTC GGCATCGCCG GTGTGCAGGG CAACGGCCAG AGCGAACTGG CCGAAGCCGT CATGGGCCTG ATGCCCAAGC TCGGCGGCAC CGTCCACATC GCCGACGTGC ACCGCACCCA CGCCTCCACC AGCGCCATCA TCGAGTCCGG GGTCGGCTAC ATCCCCGAGG ACCGGCTGGT CGACGGCCTG GTCACGGACT TCACCATCGC GGAGAACCTG ATCCTCAACC GCTACAACCG GGAGCCCTAC GCGGGCCGGG GCGTGCTCAA GGACGCGGTG ATCCGGGACA AGGCCAAGGA GTACGTCGAG ACCTTCGACG TCCGCACCCC CTCGATCGAC GCCCACGCCG GGAACCTGTC GGGCGGCAAC CAGCAGAAGG TGATCGTGGC GCGGGAACTG TCCCGGCCGC TGAAGCTGCT CATCGCCGCC CAGCCCACCC GCGGCGTCGA CGTCGGCGCG ATGGAGTTCA TCCACAAGCG CATCGTCGAC GAACGCGACG CCGGGGCCGG GGTGCTGCTG ATCTCGTCCG AACTGGACGA AGTGCTGTCC CTCGCCGACC GGGTAGCCGT GATCCACAAC GGACACATCA TCGCCGAGGT GTCCCCGGAC ACGCCGCGCG ACAAGATCGG CCAGCTCATG GCCGGAGTTC AGACCGAGGA CGACCCCCAG GAGAACGACG GTGAACGATA A
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Protein sequence | MRRSTTLRLE LSGLTKRFGD LVANDHIDLT VEAGEIHALL GENGAGKSTL MNMLYGLLTP NEGHIIIDGR KVAITSPGNA IKAGIGMVHQ HFMLVPVFTV AENVMLGREM TDGLGVLSRR KAARAVREIS ERYGLDVDPD ALVEDLPVGV QQRVEIIKAL LNDCDLLILD EPTAVLTPQE IDELLDIMRG LRADGKSIVF ISHKLKEVKA IADKITVIRR GAVVGEAAPT DSETELASMM VGRSVKLTVD KDPAQPGNPA LVIDNLTVAD SRGHHAVDGL SLTVNHGEIV GIAGVQGNGQ SELAEAVMGL MPKLGGTVHI ADVHRTHAST SAIIESGVGY IPEDRLVDGL VTDFTIAENL ILNRYNREPY AGRGVLKDAV IRDKAKEYVE TFDVRTPSID AHAGNLSGGN QQKVIVAREL SRPLKLLIAA QPTRGVDVGA MEFIHKRIVD ERDAGAGVLL ISSELDEVLS LADRVAVIHN GHIIAEVSPD TPRDKIGQLM AGVQTEDDPQ ENDGER
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