Gene Snas_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1353 
Symbol 
ID8882540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1429009 
End bp1430559 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003510154 
Protein GI291298876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.241589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAGGA GCACGACGCT GAGACTCGAA CTGAGTGGTC TGACCAAACG CTTCGGCGAC 
CTGGTGGCGA ACGACCACAT TGACCTGACA GTGGAGGCGG GTGAGATTCA CGCCCTGCTG
GGCGAGAACG GCGCCGGCAA ATCCACCCTG ATGAACATGC TCTACGGGCT GCTGACGCCC
AACGAGGGGC ACATAATCAT CGATGGCCGC AAGGTCGCCA TCACCTCCCC GGGCAACGCC
ATCAAGGCGG GCATCGGCAT GGTGCACCAG CACTTCATGC TGGTCCCGGT GTTCACCGTC
GCCGAGAACG TCATGCTCGG CCGCGAGATG ACCGACGGCC TCGGCGTCCT CAGCCGTCGC
AAGGCCGCCC GGGCGGTGCG CGAGATCTCC GAGCGCTACG GGCTCGACGT CGATCCCGAC
GCGCTGGTCG AGGACCTGCC GGTGGGCGTG CAGCAGCGCG TCGAGATCAT CAAGGCGCTG
CTCAACGACT GTGACCTGCT GATCCTGGAC GAGCCCACCG CGGTGCTCAC CCCGCAGGAG
ATCGACGAGC TGCTCGACAT CATGCGCGGG CTGCGCGCCG ACGGCAAGTC GATCGTCTTC
ATCAGCCACA AGCTCAAGGA AGTCAAGGCC ATCGCCGACA AGATCACCGT CATCCGCCGC
GGCGCGGTGG TCGGTGAGGC GGCGCCGACC GACTCCGAGA CCGAACTGGC GTCCATGATG
GTCGGACGTT CGGTGAAGCT GACCGTCGAC AAGGATCCGG CCCAGCCGGG GAACCCGGCG
CTGGTCATCG ATAACCTGAC CGTCGCCGAC TCGCGCGGCC ACCACGCCGT CGACGGCCTG
TCGCTGACCG TCAACCACGG CGAGATCGTC GGCATCGCCG GTGTGCAGGG CAACGGCCAG
AGCGAACTGG CCGAAGCCGT CATGGGCCTG ATGCCCAAGC TCGGCGGCAC CGTCCACATC
GCCGACGTGC ACCGCACCCA CGCCTCCACC AGCGCCATCA TCGAGTCCGG GGTCGGCTAC
ATCCCCGAGG ACCGGCTGGT CGACGGCCTG GTCACGGACT TCACCATCGC GGAGAACCTG
ATCCTCAACC GCTACAACCG GGAGCCCTAC GCGGGCCGGG GCGTGCTCAA GGACGCGGTG
ATCCGGGACA AGGCCAAGGA GTACGTCGAG ACCTTCGACG TCCGCACCCC CTCGATCGAC
GCCCACGCCG GGAACCTGTC GGGCGGCAAC CAGCAGAAGG TGATCGTGGC GCGGGAACTG
TCCCGGCCGC TGAAGCTGCT CATCGCCGCC CAGCCCACCC GCGGCGTCGA CGTCGGCGCG
ATGGAGTTCA TCCACAAGCG CATCGTCGAC GAACGCGACG CCGGGGCCGG GGTGCTGCTG
ATCTCGTCCG AACTGGACGA AGTGCTGTCC CTCGCCGACC GGGTAGCCGT GATCCACAAC
GGACACATCA TCGCCGAGGT GTCCCCGGAC ACGCCGCGCG ACAAGATCGG CCAGCTCATG
GCCGGAGTTC AGACCGAGGA CGACCCCCAG GAGAACGACG GTGAACGATA A
 
Protein sequence
MRRSTTLRLE LSGLTKRFGD LVANDHIDLT VEAGEIHALL GENGAGKSTL MNMLYGLLTP 
NEGHIIIDGR KVAITSPGNA IKAGIGMVHQ HFMLVPVFTV AENVMLGREM TDGLGVLSRR
KAARAVREIS ERYGLDVDPD ALVEDLPVGV QQRVEIIKAL LNDCDLLILD EPTAVLTPQE
IDELLDIMRG LRADGKSIVF ISHKLKEVKA IADKITVIRR GAVVGEAAPT DSETELASMM
VGRSVKLTVD KDPAQPGNPA LVIDNLTVAD SRGHHAVDGL SLTVNHGEIV GIAGVQGNGQ
SELAEAVMGL MPKLGGTVHI ADVHRTHAST SAIIESGVGY IPEDRLVDGL VTDFTIAENL
ILNRYNREPY AGRGVLKDAV IRDKAKEYVE TFDVRTPSID AHAGNLSGGN QQKVIVAREL
SRPLKLLIAA QPTRGVDVGA MEFIHKRIVD ERDAGAGVLL ISSELDEVLS LADRVAVIHN
GHIIAEVSPD TPRDKIGQLM AGVQTEDDPQ ENDGER