Gene Snas_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1352 
Symbol 
ID8882539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1427823 
End bp1428899 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID 
Productbasic membrane lipoprotein 
Protein accessionYP_003510153 
Protein GI291298875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAAAGT GGCGTGGACC CAGGAAGTTC GCCGCCCTCG TGGTGGCAAG CGGTGTGGCC 
CTGACCGGTC TGGCCGCTTG TGGCGAGGCC AGCGACGCCG GGTTTGTGGT CTGTATGGTC
TCCGACGAAG GCGGATTCGA CGACAAGTCG TTCAACGAGT CGGCCTGGGC GGGTATGGAA
AAGGCCAAGA AGGAGAATTC CGAGATCACG CTGAAGAAGC GTGAGTCGAA GGACAAGAGC
GATTACTCCA AGAACCTGAC CAGCTGTGTC AAGGACGACA AGGCCGATCT GACGATCGCC
GTGGGTGGAT TGATCACCGG GGACACCGAG CAGGTCGCCG AGGAGAACAA GGACAAGCGG
TTCGCGATTG TGGACTCGAA CCTGTCCGGG GCGAAGAACA AGAACGTCTT CTCGATGGAG
TTCAACACCG CGCAGTCGTC GTTCCTGGCC GGTTACCTGG CCGCCGGAAC CAGCAAGACC
GGCAAGGTGG GCACCTTCGG CGGCGCCAAC ATCCCGCCGG TGACCATCTT CATGGACGGC
TACGCCGAGG GCGTGGAGTA CTACAACAAG CAGAACAAGA AGGACGTCCA GGTCAAGGGC
TGGAAGCCGA ACTTCGAGGA CGGCAAGGGC GACGGCCTGT TCGTCGACAA CTTCGAGGAC
GCCAAGGTCG GCAAGCAGCA CGCGAACAAC CTGATGTCGC AGGGCGCCGA CGTGATCTTC
CCGGTCGCGG GTCCGGCCGG ACTCGGTGGT CCCGAGGCCA CCCAGTCCAA GGACGACGTC
TACTCCATCT GGGTCGACTC CGACGGCTGC GAGGCCGCCG CCAAGTACTG CGACGAGTTC
CTGACCTCCT CGATGAAGGG CATCGCCGAC GCGGTCGCCG AGTCCATCAA GACCGCCGTC
GACGACGGCG CCAAGGACGG CCGTTACGTC GGCACCCTGG AGAACGAGGG CGTGGGCCTC
GCCGACCTGA ACAAGGTCGT CGACGAGAAG CTCGCCAAGG AGATCGAGAC CGTCAAGAAG
GACATCATCG ACGGCAAGAT CGAGATCAAG TCCAAGAACC AGCCGAAGCC GGAATAA
 
Protein sequence
MRKWRGPRKF AALVVASGVA LTGLAACGEA SDAGFVVCMV SDEGGFDDKS FNESAWAGME 
KAKKENSEIT LKKRESKDKS DYSKNLTSCV KDDKADLTIA VGGLITGDTE QVAEENKDKR
FAIVDSNLSG AKNKNVFSME FNTAQSSFLA GYLAAGTSKT GKVGTFGGAN IPPVTIFMDG
YAEGVEYYNK QNKKDVQVKG WKPNFEDGKG DGLFVDNFED AKVGKQHANN LMSQGADVIF
PVAGPAGLGG PEATQSKDDV YSIWVDSDGC EAAAKYCDEF LTSSMKGIAD AVAESIKTAV
DDGAKDGRYV GTLENEGVGL ADLNKVVDEK LAKEIETVKK DIIDGKIEIK SKNQPKPE