Gene Snas_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1323 
Symbol 
ID8882510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1402646 
End bp1403935 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510125 
Protein GI291298847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.120407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTG TCGAACCGCG CTCGCGGCGG GGCCTGGTGG CGGTGCTGAC GGCGCTGGCG 
GCCGGTTGGA CCGGCACCCG GTTGCTGAAC ATCGCGATGC CGTGGTTCGT GTTGACCAGT
ACCGGAAGCG CCACCGCCAC CGGCCTGGTC GTGTTCGCGC AGATGGGTCC ATACGTGCTG
TGCCAGGTGC TGGCCGGGCC GCTCATCGAC CGGATCGGGC CCAAGCGGAT CAGCGTCTGG
GGCGATGTGA CCGCGGCGGT GTTCCTGGCG GCGATTCCGT TGGCGTACCA GCTGGACGTG
CTGTCGCTGC CGGTGTTGAT GGTCCTGATC GCGTTGAGCG GTGCGGCCGA GGGCCCGGCG
AACATCGCCA AGAGCGTGTT CATCCCCGCC GCCGCCACGG CCGCCGGGAT GCGGTTGGAG
CGCGCCACGG GTATCTCGGG CGCGATCGAG CGGACCGCGT CCACCGTGGG CCCGGCGGTC
GCGGGAGTCA TGGTGGGAGC CTTCGGTGGG CCGTCCGTGC TGTGGGGCAC CGCGGCGCTG
ACTGCGTTGT CGGGGTTGAT CATCGCGGTG GGCACCGTCG ATCCGCGGCG AGAGCCGGAC
GAGGACGAGG ACGCCGACGC GGGGTACCTG ACCCGGCTGC GCGGCGGTGT CGAGTTCCTG
CGGCGCGAGA AACTGCTGCT GATGATCTCG GGCATGATCA CCGTGACGAA CCTGCTGGAC
CAGGGCTGGA GCGCGGTGAT GCTTCCGCTG TGGGCCAAGG AATCCGGTTA TGGTCCCGAG
ACCGTCGGAC TGCTGTTCAG CGTGATGTCG GGGGCTTCGG TCGCGGCCAG TCTCATCGCG
GCGGCCTGGG GACACCGGCT GCCCCGGCGC ACGGTGTTCC TGCTCGGGTT CATCATCGGC
GGCGTGCCGA GGTTCATCCT GATGGCCTTC GGCGCTCCCT TGTGGCTGAT CATCGGGGTG
TTCGTGATCG GCGGCCTGGG TTCGGGCTTC CTCAACCCGA TCATCGGCGC GGTGCAGTAC
GAACGGATTC CGGCGGCGAA GCTGGGACGG GTGACGACGT TGACGCGTTC GATGGCGTGG
GCGGGCATCC CGTTCGGCGG CCTGGTCGCG AGCGGGTTCG TCGCCCTGGC GGGCCTGTCG
GGCGCGATGC TGGTCGTCGG CGGGCTCTAC CTGGCGGCGA TCCTGCTGCC GGGGCTGCGT
CCGGAGTGGA AGCAGATGAA GCAGGCTCCG GTGCCGAAGC AGCGGGAACC CGAACGCGAG
AAGGAGTGCG TCGGTTCCGG TGGCGGATAG
 
Protein sequence
MTAVEPRSRR GLVAVLTALA AGWTGTRLLN IAMPWFVLTS TGSATATGLV VFAQMGPYVL 
CQVLAGPLID RIGPKRISVW GDVTAAVFLA AIPLAYQLDV LSLPVLMVLI ALSGAAEGPA
NIAKSVFIPA AATAAGMRLE RATGISGAIE RTASTVGPAV AGVMVGAFGG PSVLWGTAAL
TALSGLIIAV GTVDPRREPD EDEDADAGYL TRLRGGVEFL RREKLLLMIS GMITVTNLLD
QGWSAVMLPL WAKESGYGPE TVGLLFSVMS GASVAASLIA AAWGHRLPRR TVFLLGFIIG
GVPRFILMAF GAPLWLIIGV FVIGGLGSGF LNPIIGAVQY ERIPAAKLGR VTTLTRSMAW
AGIPFGGLVA SGFVALAGLS GAMLVVGGLY LAAILLPGLR PEWKQMKQAP VPKQREPERE
KECVGSGGG