Gene Snas_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1319 
Symbol 
ID8882506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1399041 
End bp1399748 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510121 
Protein GI291298843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.234483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CGGTGTGGGA CTTTGTGTGG TTGGTGACGT CTTGGTTACG ACATAACGTC 
CGGAAGATGA ATACAGATGC CCCACAACCC CAGTTTCCAG TCCATACACC GCCTCCCGCA
CCAAAGAAAT CCAACAAGAC GGCGTGGATC ATTATCGGGG CCATCGGCGC CGTGGTCCTG
TTGGCCTGTT GTGGCATAAG TGCCGCCGTG TTCGCCCTCA ACGACGACAA ACCGTCCGCG
TCCGGATCCG AGAACTCAGA CTCGGACTCG GATGCGGGCA GCGACGCGAA GGACGACTCC
AAAAAGGAGA AGTCCGCGAA GATCGGAGAC ACGGTCAAGG ACGGCGACTT CGAGTTCACC
GTCACCAAGG TCGAAGACGG GGTGGACAAG GTCGGCGACC AATACCTGGA GAAGGAGGCC
TCGGGCCAGT TCGTGATCGT CCACGTCACC GTCAAGAACG TCGGCGAGAA AGCGGACCTG
TTCAGCGACA CCGAACAGAA GATCATCGAC GTCGACGGCA AGGAATACGA CGCCGACTCC
GAAGCCGGGG TCTACATCGA AGACAACCAG GCCCTGTTGG ACAACATCAA CCCCGGCAAC
GACGCCAAGG TACAGCTCGT CTTCGACGTT CCCGACAAGG TCAAACTGGA CAGCATCAAG
CTGGCCGGGA ACTTCGGCTC GGACGGGGTA TCGGTCAAGC TGAAGTAA
 
Protein sequence
MTITVWDFVW LVTSWLRHNV RKMNTDAPQP QFPVHTPPPA PKKSNKTAWI IIGAIGAVVL 
LACCGISAAV FALNDDKPSA SGSENSDSDS DAGSDAKDDS KKEKSAKIGD TVKDGDFEFT
VTKVEDGVDK VGDQYLEKEA SGQFVIVHVT VKNVGEKADL FSDTEQKIID VDGKEYDADS
EAGVYIEDNQ ALLDNINPGN DAKVQLVFDV PDKVKLDSIK LAGNFGSDGV SVKLK