Gene Snas_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1308 
Symbol 
ID8882495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1388034 
End bp1388612 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein tyrosine phosphatase 
Protein accessionYP_003510110 
Protein GI291298832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.96173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGT TCACCGTCCT GCACGTGTGC ATGGGCAACA TCTGCCGCTC GCCGATGGCC 
GAGCGGCTGC TGACGTTGCG GGTCAACCAG ATCGCCGGGG ACGAGGACCT GGTGTACAGC
CATTCCTGCG GCATCGGACT GTGGCATGTC GGCGAGCGGA TGAACCCGCC CGCCGCCCGG
GAACTGCGGT CCCGGGGCGG CACCGACGCC GGGTTCAAGG CCCAGCACAT CGCCCGTGAC
CTCGTCGAGG CGTCCGACGT GATCCTCACC GCGACCGACG AGCAGTACGA GTACATCGCC
GAGACCTTCC CCGACGCCCT GCCCCGCACC TTCCTGTTGC GGCACTTCGG GCGGCTCGCC
GCCGGGATCG ACCCGAACGA GCTGCCGGTC AGCGACGGCT CGGCCGCAGC CGTGCACGCC
AGGGGAGTGG CGCTGGTGGC CGCGGCCGAC CGGCGCCGCG ACAGCCAGGA CGCCGAGAAC
CTGGACGACC CGTGGGGAGA GTCACCCGCG ATCTTCCGCC GGATCGGCGA CGAGATCGAC
GAGGCGCTGA AGCCGGTGGT CGCCGCCCTG CTGAGCTAG
 
Protein sequence
MPPFTVLHVC MGNICRSPMA ERLLTLRVNQ IAGDEDLVYS HSCGIGLWHV GERMNPPAAR 
ELRSRGGTDA GFKAQHIARD LVEASDVILT ATDEQYEYIA ETFPDALPRT FLLRHFGRLA
AGIDPNELPV SDGSAAAVHA RGVALVAAAD RRRDSQDAEN LDDPWGESPA IFRRIGDEID
EALKPVVAAL LS