| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1286 |
|---|
| Symbol | |
|---|
| ID | 8882472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1363078 |
|---|
| End bp | 1364607 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase chain M |
|---|
| Protein accession | YP_003510088 |
|---|
| Protein GI | 291298810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.763724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTCGT TCCCATACCT GTCGGCCGTG ATCGTGGTGC CGCTCATCGG CGCCCTCATC
ACCGCCTCCG TGCCCAAGGG CAAACCGAAG CAAGCCAAGG CCATCGCGCT CGGTTTCTCG
CTGGCGGTCG CCGCCATCAC CGTCGGCGCC TGGGCGTCGT ACGACACCGG CGACACCGGG
ATGCAGCTGA CCGAGCACTA CTCCTGGGTA CCCGCCTGGG GCCTCAACCT CAGCTTCGGC
ATGGACGGCA TCGCCCTGGT CATGCTCGCC CTGACCGCGC TGCTCACCCC CATCGTCATC
CTCGCCAGCT GGAACGACGC CCACAAGCGC AACCAGCCCA CGTTCTTCGC CCTCATCCTG
GCCCTCCAGG CCACCATGAT CGGCACCTTC ATCTCCACGA ACGTGCTGCT GTTCTACATC
TTCTTCGAAG TGATGCTGGT GCCGATGTAC TTCCTCATCG GCTCCTACGG CGGCAAACGC
CGCCAGTACG CCGCGGTGAA GTTCTTCCTC TACTCACTGC TGGGCGGCAT GGTGCTGCTG
GCCGCCATCA TCGGCCTGTG GGTCACCACC GGCGGCGTCT TCGACTTCGC CACCCTCACC
GACGGCAAAC ACTCCATCGC CGAAGGCACC CTCCAGAACT GGCTGTTCCT CGGCTTCTTC
ATCGCCTTCG CCATCAAGGC GCCGTTCTTC CCGTTCCACA CCTGGCTTCC CGACGCCGGT
GGCGCCGCCC CCGCCGGGAT CGCCGCGCTG CTCGTCGGCG TCATGGACAA GATCGGCACC
TTCGCGATCC TGCGCTACTG CCTGCCGCTG TTCCCCGACG CCAGCCAGCT GTTCGCACCA
CTGGCCATCG CACTGGCCCT GGTCGGCGTC ATCTACGGCG CCCTGGTCGC CATCGGACAA
AAGGACCTGC GGCGCCTCGT CGCCTACACG TCCATCGCCC ACTTCGGATT CATCGGCGTC
GGCATCTTCG CCTTCACCAC CGAATCCGCC TCCGGCGCCG TCCTCTACAT GGTCAACCAC
GGCCTGGCCA CCGGCCTGCT GTTCATCGTC GTGGGCATGC TCGCCACCCG CCGCGGCTCC
AGCGACATCG CCGACTTCGG CGGCGCCGGA AAGACGCTGC CCCTGCTGGC CGGCACCTTC
TTCATCGCCG GACTCGCCTC GCTGGCACTG CCCGGCACCG CGCCGTTCGT GTCCGAGTTC
CTGATCCTCC TGGGCACCTA CAGCGCCAAC AAACCCGTCG CCGTCATCGC CACCCTCGGC
GTCATCCTGG CCGCCGCCTA CGTCCTGTGG ATGTACCAGC GGACCATGCA GGGCACCGTC
AACGTCAAAC TCGACGGCGT CCCGGCCATG AAACGCGACC TCAACCTCCG CGAGAAACTC
GTCGTGGCTC CCCTGATCGT CGGGATCCTC GCCCTCGGCG TATACCCGCA ACCCGTCCTC
GACGTCATCA ACCCCGCCGT CGAACACACC CTTGACAGCG TCGGCGTCAC CGGTTCCGCA
GACCAGGCCG CAACGGGAGA GAACAAGTGA
|
|---|
| Protein sequence | MNSFPYLSAV IVVPLIGALI TASVPKGKPK QAKAIALGFS LAVAAITVGA WASYDTGDTG
MQLTEHYSWV PAWGLNLSFG MDGIALVMLA LTALLTPIVI LASWNDAHKR NQPTFFALIL
ALQATMIGTF ISTNVLLFYI FFEVMLVPMY FLIGSYGGKR RQYAAVKFFL YSLLGGMVLL
AAIIGLWVTT GGVFDFATLT DGKHSIAEGT LQNWLFLGFF IAFAIKAPFF PFHTWLPDAG
GAAPAGIAAL LVGVMDKIGT FAILRYCLPL FPDASQLFAP LAIALALVGV IYGALVAIGQ
KDLRRLVAYT SIAHFGFIGV GIFAFTTESA SGAVLYMVNH GLATGLLFIV VGMLATRRGS
SDIADFGGAG KTLPLLAGTF FIAGLASLAL PGTAPFVSEF LILLGTYSAN KPVAVIATLG
VILAAAYVLW MYQRTMQGTV NVKLDGVPAM KRDLNLREKL VVAPLIVGIL ALGVYPQPVL
DVINPAVEHT LDSVGVTGSA DQAATGENK
|
|---|
| |