Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1285 |
Symbol | |
ID | 8882471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1361174 |
End bp | 1363081 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | proton-translocating NADH-quinone oxidoreductase chain L |
Protein accession | YP_003510087 |
Protein GI | 291298809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGAAGA TCGAATACGC CACCGCCACC GGTGCGCTTT CCACCGTGTG GCTGCTGATA GCGCTGCCGC TGGCCTCAGC GGCGATCCTG TTCCTGCTGG GCCGCCGCGC CGACAAGTGG GGCCACTGGC TGGGCGTCGC CTCCATCGGC GCCGCCTTCG CCCTGGGACT GACCTACTTC CTGCAACTGT CAGACCTCAG CAACAAGAGC GTGTCGCTGG ACCTGTTCAC GTTCATCGAC ACCGGGAACC TCAAGATCTC GGCCGGACTG CTGTTCGACC CGCTGTCAGC GGTGTTCGTA CTGCTCATCA CCGGCGTCGG ATTCCTCATC CACGTCTACG CCGTCGGCTA CATGTCCCAC GACGAGGGCC GCCGACGCTT CTTCGCGTTC TTCAACCTGT TCGCCGCCGC CATGCTGCTC TTGGTGCTCG GCAACAACTA CGTGATGACC TTCGTCGGCT GGGAAGGCGT CGGTCTGGCC TCGTACCTGC TGATCTCCTT CTGGTACACC AAGCCGTCCG CGGCCACCGC CGGCAAGAAG GCGTTCATCA TGAACCGCGT CGGCGACGCC GGGTTCCTGC TGGCGATCTT CGCCATGTTC GCCACCATCG GCTCCACCGA CTTCGACACC GTCTTCAACG GCGTCTCCGG AATGTCCACC GGCATCACCC TCGCCATCGG ACTGTTCCTG CTCCTGGGCG CCTGCGGCAA GTCCGGCCAG TTCCCACTCC AGGCCTGGCT CCCCGACGCC ATGGAAGGCC CCACCCCGGT CTCGGCACTG ATCCACGCCG CCACCATGGT CACCGCGGGC GTCTACCTGA TCGCCCGCTC CAACCCGATC TTCAACGCCA ACGCCACCGC CGAACTCGTC GTGGTGTCCA TCGGCGCCCT GACCCTCCTC ATCGGATGCG TCATCGGCTG CGCCAAGGAC GACATCAAAC GGGTCCTTGC CTACTCCACC GTCTCCCAGA TCGGCTACAT GTTCCTGGCC GTGGGACTCG GCGGCGGCGC CTACGCGCTG GGCATCATCC ACCTGCTCGC CCACGGCTTC TTCAAGGCCG GACTGTTCCT GGGCGCCGGA TCCGTCATGC ACGGCATGAA CGACCAGGTC GACATCCGCC GCTTCGGCGG ACTGTGGAAA CACATGAAGA TCACCTGGGT CACCTTCGGC CTCGGCTACC TGGCCATCAT CGGCCTGCCG CCGCTGTCGG GCTTCTTCAC CAAGGACCCG ATCATCCTGG CCGCGTTCAA CCGCGAAGGC TGGCAGGGCT GGCTGTTCGG CTCCGCCGCG CTGCTGGGCG CCGGACTGAC CGCCTTCTAC ATGACCCGGC TGTTCGTCCT CACCTTCCAC GGCAAGAAAC GCTGGACCGA GGACATCAAG CACCCGCACG AGTCGCCACC CATCATGTGG ATACCACTGG TGCTGCTGGC ATTCGGCTCC ATCGCCGCCG GTTTCCTCAT GAAGACCAGC GTCGTCGAAT GGCTGACCCC CATCTTCGGT GAACACGAGG AAGCCCACGG CAAACTCGGG CACGGCGCCG TCACCGGCCT GACCATGGCC GTCGTCGCCG TCGGCGTCGC CGTCGCGATC CTGCTGTTCG GCCGCGGCAC CGCACTACAG GAACAACCGG CCCGCACCCA GATCGTGCGC GCCGCCCGCG CCAACCTGTA CGCCGACCGC TTCAACGAGC TGGTCTTCGA ACTACCCGGA CGACTCCTCA CCCGCGCACT GGTGTGGGTC GACAACCGCG GCGTCGACGG CATCGTCAAC GGCCTCGCCG CCGCGATCGG GGGCGGCTCA GCCCGACTGC GCCGCACCCA GACCGGATTC GTCCGCAGCT ACGCCTTGTC CATATTGTCC GGTGCCGTCG TCGTCGTGGC GGCCTTGTTG GTGGTGACAT TCGGGTGA
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Protein sequence | MEKIEYATAT GALSTVWLLI ALPLASAAIL FLLGRRADKW GHWLGVASIG AAFALGLTYF LQLSDLSNKS VSLDLFTFID TGNLKISAGL LFDPLSAVFV LLITGVGFLI HVYAVGYMSH DEGRRRFFAF FNLFAAAMLL LVLGNNYVMT FVGWEGVGLA SYLLISFWYT KPSAATAGKK AFIMNRVGDA GFLLAIFAMF ATIGSTDFDT VFNGVSGMST GITLAIGLFL LLGACGKSGQ FPLQAWLPDA MEGPTPVSAL IHAATMVTAG VYLIARSNPI FNANATAELV VVSIGALTLL IGCVIGCAKD DIKRVLAYST VSQIGYMFLA VGLGGGAYAL GIIHLLAHGF FKAGLFLGAG SVMHGMNDQV DIRRFGGLWK HMKITWVTFG LGYLAIIGLP PLSGFFTKDP IILAAFNREG WQGWLFGSAA LLGAGLTAFY MTRLFVLTFH GKKRWTEDIK HPHESPPIMW IPLVLLAFGS IAAGFLMKTS VVEWLTPIFG EHEEAHGKLG HGAVTGLTMA VVAVGVAVAI LLFGRGTALQ EQPARTQIVR AARANLYADR FNELVFELPG RLLTRALVWV DNRGVDGIVN GLAAAIGGGS ARLRRTQTGF VRSYALSILS GAVVVVAALL VVTFG
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