Gene Snas_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1285 
Symbol 
ID8882471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1361174 
End bp1363081 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content66% 
IMG OID 
Productproton-translocating NADH-quinone oxidoreductase chain L 
Protein accessionYP_003510087 
Protein GI291298809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAAGA TCGAATACGC CACCGCCACC GGTGCGCTTT CCACCGTGTG GCTGCTGATA 
GCGCTGCCGC TGGCCTCAGC GGCGATCCTG TTCCTGCTGG GCCGCCGCGC CGACAAGTGG
GGCCACTGGC TGGGCGTCGC CTCCATCGGC GCCGCCTTCG CCCTGGGACT GACCTACTTC
CTGCAACTGT CAGACCTCAG CAACAAGAGC GTGTCGCTGG ACCTGTTCAC GTTCATCGAC
ACCGGGAACC TCAAGATCTC GGCCGGACTG CTGTTCGACC CGCTGTCAGC GGTGTTCGTA
CTGCTCATCA CCGGCGTCGG ATTCCTCATC CACGTCTACG CCGTCGGCTA CATGTCCCAC
GACGAGGGCC GCCGACGCTT CTTCGCGTTC TTCAACCTGT TCGCCGCCGC CATGCTGCTC
TTGGTGCTCG GCAACAACTA CGTGATGACC TTCGTCGGCT GGGAAGGCGT CGGTCTGGCC
TCGTACCTGC TGATCTCCTT CTGGTACACC AAGCCGTCCG CGGCCACCGC CGGCAAGAAG
GCGTTCATCA TGAACCGCGT CGGCGACGCC GGGTTCCTGC TGGCGATCTT CGCCATGTTC
GCCACCATCG GCTCCACCGA CTTCGACACC GTCTTCAACG GCGTCTCCGG AATGTCCACC
GGCATCACCC TCGCCATCGG ACTGTTCCTG CTCCTGGGCG CCTGCGGCAA GTCCGGCCAG
TTCCCACTCC AGGCCTGGCT CCCCGACGCC ATGGAAGGCC CCACCCCGGT CTCGGCACTG
ATCCACGCCG CCACCATGGT CACCGCGGGC GTCTACCTGA TCGCCCGCTC CAACCCGATC
TTCAACGCCA ACGCCACCGC CGAACTCGTC GTGGTGTCCA TCGGCGCCCT GACCCTCCTC
ATCGGATGCG TCATCGGCTG CGCCAAGGAC GACATCAAAC GGGTCCTTGC CTACTCCACC
GTCTCCCAGA TCGGCTACAT GTTCCTGGCC GTGGGACTCG GCGGCGGCGC CTACGCGCTG
GGCATCATCC ACCTGCTCGC CCACGGCTTC TTCAAGGCCG GACTGTTCCT GGGCGCCGGA
TCCGTCATGC ACGGCATGAA CGACCAGGTC GACATCCGCC GCTTCGGCGG ACTGTGGAAA
CACATGAAGA TCACCTGGGT CACCTTCGGC CTCGGCTACC TGGCCATCAT CGGCCTGCCG
CCGCTGTCGG GCTTCTTCAC CAAGGACCCG ATCATCCTGG CCGCGTTCAA CCGCGAAGGC
TGGCAGGGCT GGCTGTTCGG CTCCGCCGCG CTGCTGGGCG CCGGACTGAC CGCCTTCTAC
ATGACCCGGC TGTTCGTCCT CACCTTCCAC GGCAAGAAAC GCTGGACCGA GGACATCAAG
CACCCGCACG AGTCGCCACC CATCATGTGG ATACCACTGG TGCTGCTGGC ATTCGGCTCC
ATCGCCGCCG GTTTCCTCAT GAAGACCAGC GTCGTCGAAT GGCTGACCCC CATCTTCGGT
GAACACGAGG AAGCCCACGG CAAACTCGGG CACGGCGCCG TCACCGGCCT GACCATGGCC
GTCGTCGCCG TCGGCGTCGC CGTCGCGATC CTGCTGTTCG GCCGCGGCAC CGCACTACAG
GAACAACCGG CCCGCACCCA GATCGTGCGC GCCGCCCGCG CCAACCTGTA CGCCGACCGC
TTCAACGAGC TGGTCTTCGA ACTACCCGGA CGACTCCTCA CCCGCGCACT GGTGTGGGTC
GACAACCGCG GCGTCGACGG CATCGTCAAC GGCCTCGCCG CCGCGATCGG GGGCGGCTCA
GCCCGACTGC GCCGCACCCA GACCGGATTC GTCCGCAGCT ACGCCTTGTC CATATTGTCC
GGTGCCGTCG TCGTCGTGGC GGCCTTGTTG GTGGTGACAT TCGGGTGA
 
Protein sequence
MEKIEYATAT GALSTVWLLI ALPLASAAIL FLLGRRADKW GHWLGVASIG AAFALGLTYF 
LQLSDLSNKS VSLDLFTFID TGNLKISAGL LFDPLSAVFV LLITGVGFLI HVYAVGYMSH
DEGRRRFFAF FNLFAAAMLL LVLGNNYVMT FVGWEGVGLA SYLLISFWYT KPSAATAGKK
AFIMNRVGDA GFLLAIFAMF ATIGSTDFDT VFNGVSGMST GITLAIGLFL LLGACGKSGQ
FPLQAWLPDA MEGPTPVSAL IHAATMVTAG VYLIARSNPI FNANATAELV VVSIGALTLL
IGCVIGCAKD DIKRVLAYST VSQIGYMFLA VGLGGGAYAL GIIHLLAHGF FKAGLFLGAG
SVMHGMNDQV DIRRFGGLWK HMKITWVTFG LGYLAIIGLP PLSGFFTKDP IILAAFNREG
WQGWLFGSAA LLGAGLTAFY MTRLFVLTFH GKKRWTEDIK HPHESPPIMW IPLVLLAFGS
IAAGFLMKTS VVEWLTPIFG EHEEAHGKLG HGAVTGLTMA VVAVGVAVAI LLFGRGTALQ
EQPARTQIVR AARANLYADR FNELVFELPG RLLTRALVWV DNRGVDGIVN GLAAAIGGGS
ARLRRTQTGF VRSYALSILS GAVVVVAALL VVTFG